RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 RWDD3Q9Y3V2 267 aa5.7□□□□□ -1.5
NPIPB4-219ENST00000543660 PLIN4Q96Q06 1357 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ASPMQ8IZT6 3477 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 MINDY4BA8MYZ0 360 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 HOXA2O43364 376 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 RAB11FIP3O75154 756 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 F2P00734 622 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 GH1P01241 217 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ITGB1P05556 798 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ZNF286BP0CG31 522 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ARP10275 920 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 CALML3P27482 149 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 NRIP1P48552 1158 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 GSK3AP49840 483 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 RPS6P62753 249 aaKnown RBP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 RBM10P98175 930 aaKnown RBP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 DGKDQ16760 1214 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 MRPL14Q6P1L8 145 aaKnown RBP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 RNF207Q6ZRF8 634 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 CHST3Q7LGC8 479 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 RBM23Q86U06 439 aaKnown RBP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 KIAA2013Q8IYS2 634 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ZNF444Q8N0Y2 327 aaPredicted RBP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 TMEM57Q8N5G2 664 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 KREMEN2Q8NCW0 462 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 DNERQ8NFT8 737 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 VN1R2Q8NFZ6 395 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 FAM200AQ8TCP9 573 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 SPPL3Q8TCT6 385 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ATP8B4Q8TF62 1192 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 PIK3R5Q8WYR1 880 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 P2RX5Q93086 422 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 PPP2R3CQ969Q6 453 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ZNF689Q96CS4 500 aaPredicted RBP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ASB16Q96NS5 453 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 PLVAPQ9BX97 442 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 S1PR5Q9H228 398 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 RANBP17Q9H2T7 1088 aaKnown RBP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 CCSER2Q9H7U1 834 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 MAGEC2Q9UBF1 373 aaPredicted RBP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ISY1Q9ULR0 285 aaKnown RBP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 EXOC6BQ9Y2D4 811 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ADGRA3Q8IWK6 1321 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 ZFYVE26Q68DK2 2539 aa5.69□□□□□ -1.5
NPIPB4-219ENST00000543660 TLDC2A0PJX2 215 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 H3BRB1 525 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 RNF225M0QZC1 329 aaPredicted RBP5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 IPO8O15397 1037 aaKnown RBP5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 TPD52L2O43399 206 aaKnown RBP5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 TSPY3P0CV98 308 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 TSPY8P0CW00 308 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 HOXD8P13378 290 aaPredicted RBP5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 HOXC8P31273 242 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 CLCN5P51795 746 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 SH3BP2P78314 561 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 TFAP4Q01664 338 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 RNF187Q5TA31 235 aaPredicted RBP5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 TTBK2Q6IQ55 1244 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 BTNL9Q6UXG8 535 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 SEPT14Q6ZU15 432 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 ZBTB33Q86T24 672 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 RETREG3Q86VR2 466 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 ERC1Q8IUD2 1116 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 PLEKHM2Q8IWE5 1019 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 EXOC8Q8IYI6 725 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 UBALD2Q8IYN6 164 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 TMEM151AQ8N4L1 468 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 PPTC7Q8NI37 304 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 C1orf216Q8TAB5 229 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 RHPN1Q8TCX5 695 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 POF1BQ8WVV4 589 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 KATNAL1Q9BW62 490 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 LNPKQ9C0E8 428 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 BOLA2Q9H3K6 86 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 SMOC2Q9H3U7 446 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 TUT1Q9H6E5 874 aaKnown RBP5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 ZNF287Q9HBT7 754 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 EPB41L4AQ9HCS5 686 aaPredicted RBP5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 DDX41Q9UJV9 622 aaKnown RBP5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 DCTN4Q9UJW0 460 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 BRPF3Q9ULD4 1205 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 SORCS3Q9UPU3 1222 aa5.68□□□□□ -1.5
NPIPB4-219ENST00000543660 TTC3P53804 2025 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 ENPP3O14638 875 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 PER2O15055 1255 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 TREHO43280 583 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 PI15O43692 258 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 CAND2O75155 1236 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 PPFIA4O75335 1185 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 DGKIO75912 1065 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 LMNAP02545 664 aaKnown RBP5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 CTSHP09668 335 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 ATP5JP18859 108 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 SP100P23497 879 aaPredicted RBP5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 SLC16A2P36021 539 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 NOVP48745 357 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 MTMR3Q13615 1198 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 LAMC2Q13753 1193 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms