RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 AGBL1Q96MI9 1066 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 TEKT3Q9BXF9 490 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 SALL4Q9UJQ4 1053 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 ZNF536O15090 1300 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 FRMPD4Q14CM0 1322 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 PDE2AO00408 941 aaPredicted RBP15.27■□□□□ 0.04
MSH2-206ENST00000543555 TGFB1I1O43294 461 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 EPB41P11171 864 aaKnown RBP15.27■□□□□ 0.04
MSH2-206ENST00000543555 TNIP1Q15025 636 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 NACC1Q96RE7 527 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 MXRA8Q9BRK3 442 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 PARVGQ9HBI0 331 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 WRAP73Q9P2S5 460 aaPredicted RBP15.27■□□□□ 0.04
MSH2-206ENST00000543555 PHF20L1A8MW92 1017 aa15.27■□□□□ 0.03
MSH2-206ENST00000543555 IPO5O00410 1097 aaKnown RBP15.27■□□□□ 0.03
MSH2-206ENST00000543555 PRLRP16471 622 aa15.27■□□□□ 0.03
MSH2-206ENST00000543555 NMT1P30419 496 aaKnown RBP15.27■□□□□ 0.03
MSH2-206ENST00000543555 CASP4P49662 377 aa15.27■□□□□ 0.03
MSH2-206ENST00000543555 SMC1AQ14683 1233 aaKnown RBP15.27■□□□□ 0.03
MSH2-206ENST00000543555 ASIC2Q16515 512 aa15.27■□□□□ 0.03
MSH2-206ENST00000543555 DCAF17Q5H9S7 520 aaPredicted RBP15.27■□□□□ 0.03
MSH2-206ENST00000543555 FAM133AQ8N9E0 248 aa15.27■□□□□ 0.03
MSH2-206ENST00000543555 TRPM4Q8TD43 1214 aa15.27■□□□□ 0.03
MSH2-206ENST00000543555 DRC1Q96MC2 740 aa15.27■□□□□ 0.03
MSH2-206ENST00000543555 L1RE1Q9UN81 338 aa15.27■□□□□ 0.03
MSH2-206ENST00000543555 ZMYM2Q9UBW7 1377 aa15.27■□□□□ 0.03
MSH2-206ENST00000543555 ACTN1P12814 892 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 SLC9A1P19634 815 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 RASA3Q14644 834 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 SLC18A3Q16572 532 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 EXOC3L4Q17RC7 722 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 HDXQ7Z353 690 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 RNF10Q8N5U6 811 aaKnown RBP15.26■□□□□ 0.03
MSH2-206ENST00000543555 ANKRD13CQ8N6S4 541 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 ZNF526Q8TF50 670 aaPredicted RBP15.26■□□□□ 0.03
MSH2-206ENST00000543555 LUC7LQ9NQ29 371 aaKnown RBP15.26■□□□□ 0.03
MSH2-206ENST00000543555 SEL1LQ9UBV2 794 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 CLIC2O15247 247 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 ZNF131P52739 623 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 ARID5AQ03989 594 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 KLHL30Q0D2K2 578 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 CREG2Q8IUH2 290 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 SLC35C1Q96A29 364 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 NOX5Q96PH1 765 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 RIT2Q99578 217 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 KCND2Q9NZV8 630 aa15.26■□□□□ 0.03
MSH2-206ENST00000543555 RPTORQ8N122 1335 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 WDR46O15213 610 aaKnown RBP15.25■□□□□ 0.03
MSH2-206ENST00000543555 UCHL3P15374 230 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 PON1P27169 355 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 NFIL3Q16649 462 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 KLHDC7AQ5VTJ3 777 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 TCERG1LQ5VWI1 586 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 PRPF38AQ8NAV1 312 aaKnown RBP15.25■□□□□ 0.03
MSH2-206ENST00000543555 FIZ1Q96SL8 496 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 LXNQ9BS40 222 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
MSH2-206ENST00000543555 COL20A1Q9P218 1284 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 ODF2LQ9ULJ1 636 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 NFIBO00712 420 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 ITGB5P18084 799 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 OAS2P29728 719 aaKnown RBP15.25■□□□□ 0.03
MSH2-206ENST00000543555 ZC2HC1CQ53FD0 456 aaPredicted RBP15.25■□□□□ 0.03
MSH2-206ENST00000543555 IQCEQ6IPM2 695 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 CLEC4DQ8WXI8 215 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 LPAR1Q92633 364 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 HOOK2Q96ED9 719 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 HYOU1Q9Y4L1 999 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 PCDHB13Q9Y5F0 798 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 UBE4BO95155 1302 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 A0A087X0T9 212 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 TARSL2A2RTX5 802 aaKnown RBP15.25■□□□□ 0.03
MSH2-206ENST00000543555 FAM228BP0C875 321 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 BCRP11274 1271 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 TCP1P17987 556 aaKnown RBP15.25■□□□□ 0.03
MSH2-206ENST00000543555 PRKG1Q13976 671 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 NEK9Q8TD19 979 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 BORCS6Q96GS4 357 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 OSBPL9Q96SU4 736 aa15.25■□□□□ 0.03
MSH2-206ENST00000543555 BUB1O43683 1085 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 MCM3P25205 808 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 GBP6Q6ZN66 633 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 ZNF720Q7Z2F6 126 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 ZNF572Q7Z3I7 529 aaPredicted RBP15.24■□□□□ 0.03
MSH2-206ENST00000543555 FAM178BQ8IXR5 827 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 MSL3Q8N5Y2 521 aaKnown RBP15.24■□□□□ 0.03
MSH2-206ENST00000543555 COG1Q8WTW3 980 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 TEPSINQ96N21 525 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 SPAG5Q96R06 1193 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.24■□□□□ 0.03
MSH2-206ENST00000543555 IKZF4Q9H2S9 585 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 SUGCTQ9HAC7 445 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 LTBP3Q9NS15 1303 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 GUCY2CP25092 1073 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 FAM193AP78312 1265 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 GHRHRQ02643 423 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 ENOX2Q16206 610 aaKnown RBP15.24■□□□□ 0.03
MSH2-206ENST00000543555 IRF2BP2Q7Z5L9 587 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 BANK1Q8NDB2 785 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 KIAA1683Q9H0B3 1180 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms