RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 KLRC1P26715 233 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 RPA1P27694 616 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 THPOP40225 353 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 RGS19P49795 217 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 DNM2P50570 870 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 POLGP54098 1239 aaPredicted RBP7.05□□□□□ -1.28
LTBR-212ENST00000543542 FAAP100Q0VG06 881 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 PTK7Q13308 1070 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 DHX8Q14562 1220 aaKnown RBP7.05□□□□□ -1.28
LTBR-212ENST00000543542 IL17AQ16552 155 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 CSPP1Q1MSJ5 1256 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 SPECC1Q5M775 1068 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 EFCAB12Q6NXP0 572 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 POTEGQ6S5H5 508 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 MTHFD1LQ6UB35 978 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 SESTD1Q86VW0 696 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 CATSPER3Q86XQ3 398 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 C4orf19Q8IY42 314 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 EXOC8Q8IYI6 725 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 PIGOQ8TEQ8 1089 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 SLC7A3Q8WY07 619 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 ZBTB10Q96DT7 871 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 SCLT1Q96NL6 688 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 CLIC6Q96NY7 704 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 MAP7D2Q96T17 732 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 JPH2Q9BR39 696 aaPredicted RBP7.05□□□□□ -1.28
LTBR-212ENST00000543542 HIPK3Q9H422 1215 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 PDLIM7Q9NR12 457 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 FAM13BQ9NYF5 915 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 FBXO2Q9UK22 296 aaPredicted RBP7.05□□□□□ -1.28
LTBR-212ENST00000543542 DNM3Q9UQ16 869 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 AKT3Q9Y243 479 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 ARID2Q68CP9 1835 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 LOXHD1Q8IVV2 1947 aa7.05□□□□□ -1.28
LTBR-212ENST00000543542 TRIP12Q14669 1992 aaPredicted RBP7.04□□□□□ -1.28
LTBR-212ENST00000543542 TCHHQ07283 1943 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 E9PMD0 336 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 ZBTB39O15060 712 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 USO1O60763 962 aaKnown RBP7.04□□□□□ -1.28
LTBR-212ENST00000543542 CD4P01730 458 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 KRT18P05783 430 aaKnown RBP7.04□□□□□ -1.28
LTBR-212ENST00000543542 CTSHP09668 335 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 MUTP22033 750 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 DDIT3P35638 169 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 RFC5P40937 340 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 CCL23P55773 120 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 NPEPPSP55786 919 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 GRIN1Q05586 938 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 TMEM62Q0P6H9 643 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 KARSQ15046 597 aaKnown RBP7.04□□□□□ -1.28
LTBR-212ENST00000543542 IER5Q5VY09 327 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 RRAGBQ5VZM2 374 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 TAF2Q6P1X5 1199 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 RUFY4Q6ZNE9 571 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 ANO5Q75V66 913 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 MAEAQ7L5Y9 396 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 SH3RF1Q7Z6J0 888 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 LRRC71Q8N4P6 559 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 TMEM199Q8N511 208 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 CAGE1Q8TC20 777 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 DNAJB3Q8WWF6 145 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 SYMPKQ92797 1274 aaKnown RBP7.04□□□□□ -1.28
LTBR-212ENST00000543542 EPSTI1Q96J88 318 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 CHAMP1Q96JM3 812 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 PPP1R16BQ96T49 567 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 MTRQ99707 1265 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 HSD17B14Q9BPX1 270 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 NIFKQ9BYG3 293 aaKnown RBP7.04□□□□□ -1.28
LTBR-212ENST00000543542 PANK2Q9BZ23 570 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 GDPD2Q9HCC8 539 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 CYP26B1Q9NR63 512 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 ANKEF1Q9NU02 776 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 WRAP73Q9P2S5 460 aaPredicted RBP7.04□□□□□ -1.28
LTBR-212ENST00000543542 RCOR1Q9UKL0 485 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 GINS2Q9Y248 185 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 PCDHA2Q9Y5H9 948 aa7.04□□□□□ -1.28
LTBR-212ENST00000543542 SMIM35A0A1B0GVV1 85 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 TRIM43BA6NCK2 446 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 RSPH10B2B2RC85 870 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 KIAA0355O15063 1070 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 SLC26A4O43511 780 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 LYPLA2O95372 231 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 C22orf31O95567 290 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 EYA4O95677 639 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 TIMP1P01033 207 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 RPLP2P05387 115 aaKnown RBP7.03□□□□□ -1.28
LTBR-212ENST00000543542 RSPH10BP0C881 870 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 SPATA31C1P0DKV0 1188 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 CKBP12277 381 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 XRCC6P12956 609 aaKnown RBP eCLIP7.03□□□□□ -1.28
LTBR-212ENST00000543542 PLCG1P19174 1290 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 CYP2C18P33260 490 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 STAT6P42226 847 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 RARRES1P49788 294 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 CLCN3P51790 818 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 MDM2Q00987 491 aaPredicted RBP7.03□□□□□ -1.28
LTBR-212ENST00000543542 HIC1Q14526 733 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 EMC2Q15006 297 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 MARCH8Q5T0T0 291 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 FAM102BQ5T8I3 360 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms