RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 EPHA7Q15375 998 aa18.27■□□□□ 0.52
CIT-212ENST00000543239 TRMT1LQ7Z2T5 733 aaKnown RBP18.27■□□□□ 0.52
CIT-212ENST00000543239 USP38Q8NB14 1042 aa18.27■□□□□ 0.52
CIT-212ENST00000543239 NIFKQ9BYG3 293 aaKnown RBP18.27■□□□□ 0.52
CIT-212ENST00000543239 IFIH1Q9BYX4 1025 aaKnown RBP18.27■□□□□ 0.52
CIT-212ENST00000543239 PCDHA12Q9UN75 941 aa18.27■□□□□ 0.52
CIT-212ENST00000543239 TRPV2Q9Y5S1 764 aa18.27■□□□□ 0.52
CIT-212ENST00000543239 P4HBP07237 508 aaKnown RBP18.26■□□□□ 0.51
CIT-212ENST00000543239 GHRP10912 638 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 QARSP47897 775 aaKnown RBP18.26■□□□□ 0.51
CIT-212ENST00000543239 LPIN1Q14693 890 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 FBXO47Q5MNV8 452 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 TSHZ1Q6ZSZ6 1077 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 HERC6Q8IVU3 1022 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 KIAA0319LQ8IZA0 1049 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 BANK1Q8NDB2 785 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 MTMR9Q96QG7 549 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 CELF4Q9BZC1 486 aaKnown RBP18.26■□□□□ 0.51
CIT-212ENST00000543239 OSBPL7Q9BZF2 842 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 TTYH1Q9H313 450 aaPredicted RBP18.26■□□□□ 0.51
CIT-212ENST00000543239 SEMA6BQ9H3T3 888 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
CIT-212ENST00000543239 SMC3Q9UQE7 1217 aa18.26■□□□□ 0.51
CIT-212ENST00000543239 KIF28PB7ZC32 967 aa18.25■□□□□ 0.51
CIT-212ENST00000543239 STBD1O95210 358 aa18.25■□□□□ 0.51
CIT-212ENST00000543239 MCM7P33993 719 aa18.25■□□□□ 0.51
CIT-212ENST00000543239 CUL4AQ13619 759 aa18.25■□□□□ 0.51
CIT-212ENST00000543239 TARBP2Q15633 366 aaKnown RBP18.25■□□□□ 0.51
CIT-212ENST00000543239 NCAPH2Q6IBW4 605 aa18.25■□□□□ 0.51
CIT-212ENST00000543239 FAM43BQ6ZT52 329 aaPredicted RBP18.25■□□□□ 0.51
CIT-212ENST00000543239 ZNF710Q8N1W2 664 aa18.25■□□□□ 0.51
CIT-212ENST00000543239 ZNF576Q9H609 170 aa18.25■□□□□ 0.51
CIT-212ENST00000543239 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
CIT-212ENST00000543239 SEPT9Q9UHD8 586 aaPredicted RBP18.25■□□□□ 0.51
CIT-212ENST00000543239 YBX2Q9Y2T7 364 aaKnown RBP18.25■□□□□ 0.51
CIT-212ENST00000543239 GBF1Q92538 1859 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 MICAL3Q7RTP6 2002 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 AMHP03971 560 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 ATP2B1P20020 1258 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 TMOD1P28289 359 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 TXKP42681 527 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 RABGGTBP53611 331 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 DEFB103AP81534 67 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 TBC1D8BQ0IIM8 1120 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 TMEM62Q0P6H9 643 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 TTC38Q5R3I4 469 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 C4orf19Q8IY42 314 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 METTL13Q8N6R0 699 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 LINC01465Q8N7H1 131 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 NEK9Q8TD19 979 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 FAM161BQ96MY7 647 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 GUCD1Q96NT3 240 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 MAP7D2Q96T17 732 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 SLC28A3Q9HAS3 691 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 PPME1Q9Y570 386 aa18.24■□□□□ 0.51
CIT-212ENST00000543239 EFCAB12Q6NXP0 572 aa18.23■□□□□ 0.51
CIT-212ENST00000543239 ANO5Q75V66 913 aa18.23■□□□□ 0.51
CIT-212ENST00000543239 CEP89Q96ST8 783 aa18.23■□□□□ 0.51
CIT-212ENST00000543239 LXNQ9BS40 222 aa18.23■□□□□ 0.51
CIT-212ENST00000543239 TMEM60Q9H2L4 133 aa18.23■□□□□ 0.51
CIT-212ENST00000543239 NKX2-4Q9H2Z4 354 aa18.23■□□□□ 0.51
CIT-212ENST00000543239 ZSWIM4Q9H7M6 989 aa18.23■□□□□ 0.51
CIT-212ENST00000543239 PTPRSQ13332 1948 aa18.23■□□□□ 0.51
CIT-212ENST00000543239 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
CIT-212ENST00000543239 H3BQV1 296 aa18.22■□□□□ 0.51
CIT-212ENST00000543239 GJB5O95377 273 aa18.22■□□□□ 0.51
CIT-212ENST00000543239 OR52Z1P0C646 297 aa18.22■□□□□ 0.51
CIT-212ENST00000543239 CLCN3P51790 818 aa18.22■□□□□ 0.51
CIT-212ENST00000543239 MTERF2Q49AM1 385 aa18.22■□□□□ 0.51
CIT-212ENST00000543239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.22■□□□□ 0.51
CIT-212ENST00000543239 JPH2Q9BR39 696 aaPredicted RBP18.22■□□□□ 0.51
CIT-212ENST00000543239 ZBED2Q9BTP6 218 aa18.22■□□□□ 0.51
CIT-212ENST00000543239 AGO3Q9H9G7 860 aaKnown RBP18.22■□□□□ 0.51
CIT-212ENST00000543239 WRAP73Q9P2S5 460 aaPredicted RBP18.22■□□□□ 0.51
CIT-212ENST00000543239 IGKV6-21A0A0C4DH24 114 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.21■□□□□ 0.51
CIT-212ENST00000543239 TLL1O43897 1013 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 MAFO75444 373 aaPredicted RBP18.21■□□□□ 0.51
CIT-212ENST00000543239 VTNP04004 478 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 MYOGP15173 224 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 CD52P31358 61 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 CRYBB1P53674 252 aaPredicted RBP18.21■□□□□ 0.51
CIT-212ENST00000543239 PAK2Q13177 524 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 ZNF174Q15697 407 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 ODR4Q5SWX8 454 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 PPP2R2DQ66LE6 453 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 MCTP1Q6DN14 999 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 EXOC8Q8IYI6 725 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 MYOCDQ8IZQ8 938 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 DYDC2Q96IM9 177 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 RAD9AQ99638 391 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 HSD17B14Q9BPX1 270 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
CIT-212ENST00000543239 FTHL17Q9BXU8 183 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 CYP26B1Q9NR63 512 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 RGL1Q9NZL6 768 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 AKT3Q9Y243 479 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 STXBP5LQ9Y2K9 1186 aa18.21■□□□□ 0.51
CIT-212ENST00000543239 CHD9Q3L8U1 2897 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms