RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 GBP7Q8N8V2 638 aaPredicted RBP12.25□□□□□ -0.45
CDH4-201ENST00000543233 RAPGEF5Q92565 580 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 CEP95Q96GE4 821 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 SCOCQ9UIL1 159 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 TMEM98Q9Y2Y6 226 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 NID2Q14112 1375 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 FAM196BA6NMK8 535 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 GCOM1H8Y6P7 765 aaPredicted RBP12.24□□□□□ -0.45
CDH4-201ENST00000543233 MYZAPP0CAP1 466 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 DNA2P51530 1060 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 CACNB3P54284 484 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 OLFML2BQ68BL8 750 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 DHRS1Q96LJ7 313 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 CORO1BQ9BR76 489 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 RTFDC1Q9BY42 306 aaPredicted RBP12.24□□□□□ -0.45
CDH4-201ENST00000543233 CARD9Q9H257 536 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
CDH4-201ENST00000543233 PLAAQ9Y263 795 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 H0Y3Z8 333 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 CCNT1O60563 726 aaKnown RBP12.24□□□□□ -0.45
CDH4-201ENST00000543233 PCP11498 1178 aaKnown RBP12.24□□□□□ -0.45
CDH4-201ENST00000543233 GSTO1P78417 241 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 BYSLQ13895 437 aaKnown RBP12.24□□□□□ -0.45
CDH4-201ENST00000543233 MYBPC2Q14324 1141 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 TSNAXIP1Q2TAA8 658 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 CYP26C1Q6V0L0 522 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 DTHD1Q6ZMT9 781 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 ARHGAP18Q8N392 663 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 OR2W6PQ8NHA6 318 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 PIGSQ96S52 555 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 ECM29Q5VYK3 1845 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 MYH6P13533 1939 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 USP17L5A8MUK1 530 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 FAM153BP0C7A2 387 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 ZNF18P17022 549 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 CXCR5P32302 372 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 MUM1Q2TAK8 710 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 FAM153CQ494X1 144 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 DGKHQ86XP1 1220 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 TRIML1Q8N9V2 468 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 COA7Q96BR5 231 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 IWS1Q96ST2 819 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 DMAP1Q9NPF5 467 aaPredicted RBP12.24□□□□□ -0.45
CDH4-201ENST00000543233 FAM153AQ9UHL3 310 aa12.24□□□□□ -0.45
CDH4-201ENST00000543233 COL22A1Q8NFW1 1626 aaPredicted RBP12.24□□□□□ -0.45
CDH4-201ENST00000543233 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 ARAP2Q8WZ64 1704 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 NDUFB5O43674 189 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 USO1O60763 962 aaKnown RBP12.23□□□□□ -0.45
CDH4-201ENST00000543233 CALML3P27482 149 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 HLTFQ14527 1009 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDH4-201ENST00000543233 ECT2Q9H8V3 914 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDH4-201ENST00000543233 TMEM260Q9NX78 707 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 EHD2Q9NZN4 543 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 SMCO2A6NFE2 343 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 SMAPO00193 183 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 GBP1P32455 592 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 SEPT2Q15019 361 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 FAM47EQ6ZV65 393 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 PALB2Q86YC2 1186 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 TBC1D16Q8TBP0 767 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 HPS3Q969F9 1004 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 SAMD15Q9P1V8 674 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 TUBGCP4Q9UGJ1 667 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 INTUQ9ULD6 942 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 PCDHA6Q9UN73 950 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 ZNF711Q9Y462 761 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 PCDHA8Q9Y5H6 950 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 CD2APQ9Y5K6 639 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 FLT1P17948 1338 aa12.23□□□□□ -0.45
CDH4-201ENST00000543233 SMIM23A6NLE4 172 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 PPP1R3GB7ZBB8 358 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 BMP15O95972 392 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 ETS2P15036 469 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 KRT9P35527 623 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 CARSP49589 748 aaKnown RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 CLCN2P51788 898 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 TCP10Q12799 353 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 ZNF268Q14587 947 aaPredicted RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 NT5DC1Q5TFE4 455 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 SPATA1Q5VX52 437 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 MIGA2Q7L4E1 593 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 SPIRE2Q8WWL2 714 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 GJA10Q969M2 543 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 CLMNQ96JQ2 1002 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 ELAC2Q9BQ52 826 aaKnown RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 AGAP1Q9UPQ3 857 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 WDR37Q9Y2I8 494 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 TIAM2Q8IVF5 1701 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 BCORQ6W2J9 1755 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 ZSCAN5CA6NGD5 496 aaPredicted RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 PDLIM1O00151 329 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 IPO5O00410 1097 aaKnown RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 CTNND1O60716 968 aaKnown RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 SLC16A2P36021 539 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 TECP42680 631 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms