RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 MEIS2O14770 477 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 FLOT1O75955 427 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 MYBP10242 640 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 PON1P27169 355 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 PRKCIP41743 596 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 PABPC4Q13310 644 aaKnown RBP eCLIP18.13■□□□□ 0.491e-12■■■■□ 20.9
KDM2B-216ENST00000543025 PRR16Q569H4 304 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 DCAF8Q5TAQ9 597 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 SFR1Q86XK3 245 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 KLHL7Q8IXQ5 586 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 CRYGNQ8WXF5 182 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 MXD3Q9BW11 206 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 TAF1DQ9H5J8 278 aaPredicted RBP18.13■□□□□ 0.49
KDM2B-216ENST00000543025 PSME4Q14997 1843 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 ECE2O60344 883 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 ANXA13P27216 316 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 NOP2P46087 812 aaKnown RBP18.13■□□□□ 0.49
KDM2B-216ENST00000543025 PSMC6P62333 389 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 PDCLQ13371 301 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 CDC42EP5Q6NZY7 148 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 ALKBH5Q6P6C2 394 aaKnown RBP18.13■□□□□ 0.49
KDM2B-216ENST00000543025 PACS2Q86VP3 889 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 C1orf131Q8NDD1 294 aaKnown RBP18.13■□□□□ 0.49
KDM2B-216ENST00000543025 ACTRT1Q8TDG2 376 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 DCAF4Q8WV16 495 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 ISCUQ9H1K1 167 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 EFCC1Q9HA90 598 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 FBXL5Q9UKA1 691 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 STK24Q9Y6E0 443 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 FAM169AQ9Y6X4 670 aa18.13■□□□□ 0.49
KDM2B-216ENST00000543025 ATP8B3O60423 1300 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 CPP00450 1065 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 Q4G0T1 1027 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 DCAF17Q5H9S7 520 aaPredicted RBP18.12■□□□□ 0.49
KDM2B-216ENST00000543025 MCTP2Q6DN12 878 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 LRRC57Q8N9N7 239 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 RABEP2Q9H5N1 569 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 METTL14Q9HCE5 456 aaKnown RBP18.12■□□□□ 0.49
KDM2B-216ENST00000543025 VGLL3A8MV65 326 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 MEIS1O00470 390 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 SPATA31C1P0DKV0 1188 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 HOXD13P35453 343 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 ATP1A2P50993 1020 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 SCNN1DP51172 638 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 EMC10Q5UCC4 262 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 RBM46Q8TBY0 533 aaKnown RBP18.12■□□□□ 0.49
KDM2B-216ENST00000543025 SCFD2Q8WU76 684 aa18.12■□□□□ 0.49
KDM2B-216ENST00000543025 CALR3Q96L12 384 aaKnown RBP18.12■□□□□ 0.49
KDM2B-216ENST00000543025 TYW1Q9NV66 732 aaKnown RBP18.12■□□□□ 0.49
KDM2B-216ENST00000543025 AKAP3O75969 853 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 RPL13P26373 211 aaKnown RBP18.11■□□□□ 0.49
KDM2B-216ENST00000543025 HSPA9P38646 679 aaKnown RBP18.11■□□□□ 0.49
KDM2B-216ENST00000543025 TRADDQ15628 312 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 VPS36Q86VN1 386 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 MKL1Q969V6 931 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 LTBP3Q9NS15 1303 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 NDUFAB1O14561 156 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 SLC16A3O15427 465 aaKnown RBP18.11■□□□□ 0.49
KDM2B-216ENST00000543025 ZEB2O60315 1214 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 EEF2P13639 858 aaKnown RBP18.11■□□□□ 0.49
KDM2B-216ENST00000543025 NR1D1P20393 614 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 CUL1Q13616 776 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 EPHA7Q15375 998 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 BMT2Q1RMZ1 405 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 TCERG1LQ5VWI1 586 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 SLFN13Q68D06 897 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 HHIPL2Q6UWX4 724 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 PODNQ7Z5L7 613 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 LARGE2Q8N3Y3 721 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 TEKT1Q969V4 418 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 ATP6V1G3Q96LB4 118 aa18.11■□□□□ 0.49
KDM2B-216ENST00000543025 HMGB1P1B2RPK0 211 aaPredicted RBP18.1■□□□□ 0.49
KDM2B-216ENST00000543025 CEP104O60308 925 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 NFIAQ12857 509 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 HLTFQ14527 1009 aaKnown RBP eCLIP18.1■□□□□ 0.49
KDM2B-216ENST00000543025 APOBEC3HQ6NTF7 200 aaKnown RBP18.1■□□□□ 0.49
KDM2B-216ENST00000543025 TPCN2Q8NHX9 752 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 LENG9Q96B70 501 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 RNPC3Q96LT9 517 aaKnown RBP18.1■□□□□ 0.49
KDM2B-216ENST00000543025 VPS33BQ9H267 617 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 GOLPH3Q9H4A6 298 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 DNAJC18Q9H819 358 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 KCNQ5Q9NR82 932 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 NYAP2Q9P242 653 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 PGRMC1O00264 195 aaKnown RBP18.1■□□□□ 0.49
KDM2B-216ENST00000543025 NR3C1P04150 777 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 SLURP2P0DP57 97 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 ERVK-9P63128 1117 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 LMBR1Q8WVP7 490 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 FAM20AQ96MK3 541 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 P2RX7Q99572 595 aaKnown RBP18.1■□□□□ 0.49
KDM2B-216ENST00000543025 AMNQ9BXJ7 453 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 UTRNP46939 3433 aa18.1■□□□□ 0.49
KDM2B-216ENST00000543025 ASTN1O14525 1302 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 SPDYE3A6NKU9 549 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 YBX3P16989 372 aaKnown RBP eCLIP18.09■□□□□ 0.491e-6■■■■□ 21.3
KDM2B-216ENST00000543025 JAM2P57087 298 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 MICALL1Q8N3F8 863 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 SLC35C1Q96A29 364 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■□□ 15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms