RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 HSP90AA2PQ14568 343 aaPredicted RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 SNRNP48Q6IEG0 339 aaKnown RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 RSRC2Q7L4I2 434 aaKnown RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 RRAGAQ7L523 313 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 PDCL2Q8N4E4 241 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 INPP4AQ96PE3 977 aaPredicted RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 DMAC2Q9NW81 257 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 ARMCX3Q9UH62 379 aaPredicted RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 TFR2Q9UP52 801 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 SPDYE16A6NNV3 312 aaPredicted RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 RGS20O76081 388 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 EIF4A3P38919 411 aaKnown RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 QARSP47897 775 aaKnown RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 RARRES1P49788 294 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 SUPT20HL1Q3ZLR7 823 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 PADI6Q6TGC4 694 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 SLC35C1Q96A29 364 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 SENP7Q9BQF6 1050 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 MAF1Q9H063 256 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
LDB3-207ENST00000542786 POLR2AP24928 1970 aaKnown RBP15.58■□□□□ 0.09
LDB3-207ENST00000542786 EFCAB8A8MWE9 144 aa15.58■□□□□ 0.08
LDB3-207ENST00000542786 MYCLP12524 364 aaPredicted RBP15.58■□□□□ 0.08
LDB3-207ENST00000542786 H2AFXP16104 143 aaPredicted RBP15.58■□□□□ 0.08
LDB3-207ENST00000542786 VAV2P52735 878 aa15.58■□□□□ 0.08
LDB3-207ENST00000542786 ARHGEF16Q5VV41 709 aa15.58■□□□□ 0.08
LDB3-207ENST00000542786 DLK2Q6UY11 383 aa15.58■□□□□ 0.08
LDB3-207ENST00000542786 C4orf19Q8IY42 314 aa15.58■□□□□ 0.08
LDB3-207ENST00000542786 GPRASP2Q96D09 838 aa15.58■□□□□ 0.08
LDB3-207ENST00000542786 TEX13BQ9BXU2 312 aa15.58■□□□□ 0.08
LDB3-207ENST00000542786 PLCB1Q9NQ66 1216 aa15.58■□□□□ 0.08
LDB3-207ENST00000542786 CGNQ9P2M7 1197 aaKnown RBP15.58■□□□□ 0.08
LDB3-207ENST00000542786 CDC23Q9UJX2 597 aa15.58■□□□□ 0.08
LDB3-207ENST00000542786 SSU72P8A0A1W2PR75 194 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 CTAGE9A4FU28 777 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 NR3C2P08235 984 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 RPL13P26373 211 aaKnown RBP15.57■□□□□ 0.08
LDB3-207ENST00000542786 CCND2P30279 289 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 JAK3P52333 1124 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 CYP27A1Q02318 531 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 TUBB2AQ13885 445 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 VGLL4Q14135 290 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 FBXO38Q6PIJ6 1188 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 KSR1Q8IVT5 923 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 FAM178BQ8IXR5 827 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 JAKMIP2Q96AA8 810 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 NAPGQ99747 312 aaPredicted RBP15.57■□□□□ 0.08
LDB3-207ENST00000542786 CRACR2AQ9BSW2 395 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 TUBB2BQ9BVA1 445 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 METTL14Q9HCE5 456 aaKnown RBP15.57■□□□□ 0.08
LDB3-207ENST00000542786 CYP39A1Q9NYL5 469 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 RBAK-RBAKDNI3L0D1 243 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 CLIC2O15247 247 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 DDNO94850 711 aaPredicted RBP15.57■□□□□ 0.08
LDB3-207ENST00000542786 AFPP02771 609 aaKnown RBP15.57■□□□□ 0.08
LDB3-207ENST00000542786 MAPTP10636 758 aaKnown RBP15.57■□□□□ 0.08
LDB3-207ENST00000542786 KCNA2P16389 499 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 KIF11P52732 1056 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 KRT76Q01546 638 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 ODR4Q5SWX8 454 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 RDM1Q8NG50 284 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 TMEM174Q8WUU8 243 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 MKNK1Q9BUB5 465 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 NUCKS1Q9H1E3 243 aaKnown RBP15.57■□□□□ 0.08
LDB3-207ENST00000542786 SIX2Q9NPC8 291 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 A1CFQ9NQ94 594 aaKnown RBP15.57■□□□□ 0.08
LDB3-207ENST00000542786 AGPAT3Q9NRZ7 376 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 GUCA1BQ9UMX6 200 aa15.57■□□□□ 0.08
LDB3-207ENST00000542786 WDR64B1ANS9 1081 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 STBD1O95210 358 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 SFNP31947 248 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 POLR2FP61218 127 aaKnown RBP15.56■□□□□ 0.08
LDB3-207ENST00000542786 CCDC122Q5T0U0 273 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 SLC9A9Q8IVB4 645 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 MNS1Q8NEH6 495 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 CCDC42Q96M95 316 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 NLRC4Q9NPP4 1024 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 ADARB2Q9NS39 739 aaKnown RBP15.56■□□□□ 0.08
LDB3-207ENST00000542786 AIPL1Q9NZN9 384 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 TMOD4Q9NZQ9 345 aa15.56■□□□□ 0.08
LDB3-207ENST00000542786 MYH11P35749 1972 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 TMEM150BA6NC51 233 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 BACH1O14867 736 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 EPB41P11171 864 aaKnown RBP15.55■□□□□ 0.08
LDB3-207ENST00000542786 PON1P27169 355 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 YWHABP31946 246 aaKnown RBP15.55■□□□□ 0.08
LDB3-207ENST00000542786 PSMC5P62195 406 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 ZNF746Q6NUN9 644 aaPredicted RBP15.55■□□□□ 0.08
LDB3-207ENST00000542786 KIAA1328Q86T90 577 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 RBM46Q8TBY0 533 aaKnown RBP15.55■□□□□ 0.08
LDB3-207ENST00000542786 NSUN6Q8TEA1 469 aaKnown RBP15.55■□□□□ 0.08
LDB3-207ENST00000542786 ACAD9Q9H845 621 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 ANKEF1Q9NU02 776 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 PCDHA13Q9Y5I0 950 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 DUSP10Q9Y6W6 482 aa15.55■□□□□ 0.08
LDB3-207ENST00000542786 GTPBP10A4D1E9 387 aaKnown RBP15.54■□□□□ 0.08
LDB3-207ENST00000542786 ADM5C9JUS6 153 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 PJA2O43164 708 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms