RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SERINC3Q13530 473 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 RASA3Q14644 834 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 GPR155Q7Z3F1 870 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 RALYLQ86SE5 291 aaKnown RBP7.24□□□□□ -1.25
XRCC4-206ENST00000542685 CBLCQ9ULV8 474 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 RPRD2Q5VT52 1461 aaKnown RBP7.24□□□□□ -1.25
XRCC4-206ENST00000542685 KIF14Q15058 1648 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 H0Y858 1186 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 MAN2B1O00754 1011 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 KCNK3O14649 394 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 WNT9AO14904 365 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 CLGNO14967 610 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 GPR42O15529 346 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 AMY2AP04746 511 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 HMGB1P09429 215 aaKnown RBP7.23□□□□□ -1.25
XRCC4-206ENST00000542685 NAT1P18440 290 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 AMY2BP19961 511 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 DNM2P50570 870 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 EPHB4P54760 987 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 JAM2P57087 298 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 DBPQ10586 325 aaPredicted RBP7.23□□□□□ -1.25
XRCC4-206ENST00000542685 ICAM4Q14773 271 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 CIR1Q86X95 450 aaPredicted RBP7.23□□□□□ -1.25
XRCC4-206ENST00000542685 ZC3H7AQ8IWR0 971 aaKnown RBP7.23□□□□□ -1.25
XRCC4-206ENST00000542685 SNTG2Q9NY99 539 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 ARHGAP28Q9P2N2 729 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 ATP23Q9Y6H3 246 aa7.23□□□□□ -1.25
XRCC4-206ENST00000542685 DNMT1P26358 1616 aaKnown RBP7.23□□□□□ -1.25
XRCC4-206ENST00000542685 ROCK1Q13464 1354 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 PTPRKQ15262 1439 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 SPATA31E1Q6ZUB1 1445 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 CCDC66A2RUB6 948 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 CDK11BP21127 795 aaKnown RBP7.22□□□□□ -1.25
XRCC4-206ENST00000542685 CRY1Q16526 586 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 C16orf59Q7L2K0 433 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 DVL3Q92997 716 aaPredicted RBP7.22□□□□□ -1.25
XRCC4-206ENST00000542685 SIN3AQ96ST3 1273 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 NDOR1Q9UHB4 597 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 MBD5Q9P267 1494 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 E9PCH4 1651 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 ADGBQ8N7X0 1667 aa7.22□□□□□ -1.25
XRCC4-206ENST00000542685 FHOD3Q2V2M9 1422 aa7.21□□□□□ -1.25
XRCC4-206ENST00000542685 SCAPERQ9BY12 1400 aa7.21□□□□□ -1.25
XRCC4-206ENST00000542685 GSTA4O15217 222 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 PTMAP06454 111 aaKnown RBP7.21□□□□□ -1.26
XRCC4-206ENST00000542685 CSF2RBP32927 897 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 MMP14P50281 582 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 RBL2Q08999 1139 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 LONRF2Q1L5Z9 754 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 FAM47CQ5HY64 1035 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 FIGNQ5HY92 759 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 SLFN13Q68D06 897 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 ARMC5Q96C12 935 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 AJUBAQ96IF1 538 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 SRPK1Q96SB4 655 aaKnown RBP7.21□□□□□ -1.26
XRCC4-206ENST00000542685 DNAJC7Q99615 494 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 C1QTNF3Q9BXJ4 246 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 TOPBP1Q92547 1522 aa7.21□□□□□ -1.26
XRCC4-206ENST00000542685 INSRP06213 1382 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 KTN1Q86UP2 1357 aaKnown RBP7.2□□□□□ -1.26
XRCC4-206ENST00000542685 NESP48681 1621 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 POLA1P09884 1462 aaPredicted RBP7.2□□□□□ -1.26
XRCC4-206ENST00000542685 ESYT3A0FGR9 886 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 FSD2A1L4K1 749 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 ZNF561-AS1K7EIQ3 104 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 MRE11P49959 708 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 IRX3P78415 501 aaPredicted RBP7.2□□□□□ -1.26
XRCC4-206ENST00000542685 KISS1RQ969F8 398 aaPredicted RBP7.2□□□□□ -1.26
XRCC4-206ENST00000542685 ZNF622Q969S3 477 aaKnown RBP eCLIP7.2□□□□□ -1.26
XRCC4-206ENST00000542685 MEGF9Q9H1U4 602 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 SLC52A2Q9HAB3 445 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 SMURF1Q9HCE7 757 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 TMEM51Q9NW97 253 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 PTPN22Q9Y2R2 807 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 MTUS2Q5JR59 1369 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 CCDC7Q96M83 1385 aa7.2□□□□□ -1.26
XRCC4-206ENST00000542685 CROCC2H7BZ55 1655 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 PRAMEF25A6NGN4 478 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 DYNC1I1O14576 645 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 CNOT4O95628 575 aaKnown RBP7.19□□□□□ -1.26
XRCC4-206ENST00000542685 ZNF888P0CJ79 500 aaPredicted RBP7.19□□□□□ -1.26
XRCC4-206ENST00000542685 GJA4P35212 333 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 ZNF585AQ6P3V2 769 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 LRP10Q7Z4F1 713 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 IFNL2Q8IZJ0 200 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 CISD2Q8N5K1 135 aaKnown RBP7.19□□□□□ -1.26
XRCC4-206ENST00000542685 PMFBP1Q8TBY8 1022 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 TSPYL1Q9H0U9 437 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 DEF6Q9H4E7 631 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 YY1AP1Q9H869 796 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 LAMC3Q9Y6N6 1575 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 ITSN2Q9NZM3 1697 aa7.19□□□□□ -1.26
XRCC4-206ENST00000542685 FANCD2Q9BXW9 1451 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 ARHGEF12Q9NZN5 1544 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 KDM5CP41229 1560 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.18□□□□□ -1.26
XRCC4-206ENST00000542685 RASGRP1O95267 797 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 APPP05067 770 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 USP10Q14694 798 aaKnown RBP7.18□□□□□ -1.26
XRCC4-206ENST00000542685 ZC3H12BQ5HYM0 836 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms