RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ARL4CP56559 192 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 RASSF3Q86WH2 238 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 THAP11Q96EK4 314 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 ZWILCHQ9H900 591 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 CDH2P19022 906 aaPredicted RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 OSBPP22059 807 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 PDCD6IPQ8WUM4 868 aaKnown RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 PBXIP1Q96AQ6 731 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 CNBD2Q96M20 576 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 LSG1Q9H089 658 aaKnown RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 PIK3R2O00459 728 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 NNMTP40261 264 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 Q3C1V9 767 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 ST13P5Q8NFI4 369 aaPredicted RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 GINS4Q9BRT9 223 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 NXF1Q9UBU9 619 aaKnown RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 SEPT3Q9UH03 358 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 RUNX1T1Q06455 604 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
HMGA2-210ENST00000541363 TMEM191CA6NGB0 347 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 DDAH1O94760 285 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 GFPT2O94808 682 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 CCNA1P78396 465 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 HORMAD1Q86X24 394 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 DDX17Q92841 729 aaKnown RBP16.4■□□□□ 0.22
HMGA2-210ENST00000541363 RPF1Q9H9Y2 349 aaKnown RBP16.4■□□□□ 0.22
HMGA2-210ENST00000541363 TBC1D23Q9NUY8 699 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 LCMT1Q9UIC8 334 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 MED23Q9ULK4 1368 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 CNGA3Q16281 694 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 TBC1D19Q8N5T2 526 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 PARVGQ9HBI0 331 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.4■□□□□ 0.22
HMGA2-210ENST00000541363 CDO1Q16878 200 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 FGD2Q7Z6J4 655 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 SAYSD1Q9NPB0 183 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 EIF2AK4Q9P2K8 1649 aaKnown RBP16.4■□□□□ 0.22
HMGA2-210ENST00000541363 RASA4BC9J798 803 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 RASA4O43374 803 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 RBL2Q08999 1139 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 DPY19L2Q6NUT2 758 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 LRRC47Q8N1G4 583 aaKnown RBP16.4■□□□□ 0.22
HMGA2-210ENST00000541363 LMBRD1Q9NUN5 540 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 USE1Q9NZ43 259 aa16.4■□□□□ 0.22
HMGA2-210ENST00000541363 ZNF500O60304 480 aaPredicted RBP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 TRIP4Q15650 581 aaPredicted RBP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 BRIP1Q9BX63 1249 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 FOSP01100 380 aaPredicted RBP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 MAN2A1Q16706 1144 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 NLRP4Q96MN2 994 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 CYP26B1Q9NR63 512 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 ARHGEF3Q9NR81 526 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 C16orf96A6NNT2 1141 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 C5orf58C9J3I9 102 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 SGSM2O43147 1006 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 MAGEA9P43362 315 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 PTGDRQ13258 359 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 INPP5AQ14642 412 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 KLHL38Q2WGJ6 581 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 PKN3Q6P5Z2 889 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 FAM133AQ8N9E0 248 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.39■□□□□ 0.211e-7■■□□□ 11.4
HMGA2-210ENST00000541363 ZNF594Q96JF6 807 aaPredicted RBP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 DBNDD2Q9BQY9 259 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 KLRF2D3W0D1 207 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 SPDYE7PQ495Y7 208 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 CALR3Q96L12 384 aaKnown RBP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 EHD2Q9NZN4 543 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 FAM32AQ9Y421 112 aaKnown RBP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 CCDC195A0A1B0GUA6 201 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 PDCLQ13371 301 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 C16orf62Q7Z3J2 963 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 CC2D2AQ9P2K1 1620 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 CHUKO15111 745 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 GSPT1P15170 499 aaKnown RBP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 CYP4A11Q02928 519 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 C19orf60Q96EN9 201 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 STAMBPL1Q96FJ0 436 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 THOC1Q96FV9 657 aaKnown RBP16.39■□□□□ 0.21
HMGA2-210ENST00000541363 AK8Q96MA6 479 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 KLHL31Q9H511 634 aa16.39■□□□□ 0.21
HMGA2-210ENST00000541363 CFAP69A5D8W1 941 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 SLC7A5Q01650 507 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 PRKCQQ04759 706 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 ANO4Q32M45 955 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 DSTYKQ6XUX3 929 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 CDR2LQ86X02 465 aaPredicted RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 DDIASQ8IXT1 998 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 ADD3Q9UEY8 706 aaKnown RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 PCDHA13Q9Y5I0 950 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 CAV1Q03135 178 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 POU5F1BQ06416 359 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 CHMP1BQ7LBR1 199 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms