RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 AGO3Q9H9G7 860 aaKnown RBP10.99□□□□□ -0.65
YBX3-211ENST00000541351 EPB41L4AQ9HCS5 686 aaPredicted RBP10.99□□□□□ -0.65
YBX3-211ENST00000541351 IL17RBQ9NRM6 502 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 ANKFY1Q9P2R3 1169 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 STK39Q9UEW8 545 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 LHX6Q9UPM6 363 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 TRPV2Q9Y5S1 764 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 IGSF9BQ9UPX0 1349 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 ZFYVE26Q68DK2 2539 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 SETXQ7Z333 2677 aaKnown RBP10.98□□□□□ -0.65
YBX3-211ENST00000541351 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.98□□□□□ -0.65
YBX3-211ENST00000541351 NARSO43776 548 aaKnown RBP10.98□□□□□ -0.65
YBX3-211ENST00000541351 RAB11FIP3O75154 756 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 HMMRO75330 724 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 CXCL14O95715 111 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 CFBP00751 764 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 TGM1P22735 817 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 PDE4AP27815 886 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 NOVP48745 357 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 STARD6P59095 220 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 SPEM2Q0P670 501 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 GRIK4Q16099 956 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 CSRP2Q16527 193 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 TMC5Q6UXY8 1006 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 RTN4RL1Q86UN2 441 aaPredicted RBP10.98□□□□□ -0.65
YBX3-211ENST00000541351 VSIG10LQ86VR7 867 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 TMEM57Q8N5G2 664 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 CELF5Q8N6W0 485 aaKnown RBP10.98□□□□□ -0.65
YBX3-211ENST00000541351 C12orf76Q8N812 135 aaPredicted RBP10.98□□□□□ -0.65
YBX3-211ENST00000541351 GPR152Q8TDT2 470 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 RSPH1Q8WYR4 309 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 TMEM169Q96HH4 297 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 TMEM117Q9H0C3 514 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 ELAC1Q9H777 363 aaKnown RBP10.98□□□□□ -0.65
YBX3-211ENST00000541351 C1orf115Q9H7X2 142 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 SLC2A4RGQ9NR83 387 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 TMEM161AQ9NX61 479 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 ERAP1Q9NZ08 941 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 COL20A1Q9P218 1284 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 PCDHA1Q9Y5I3 950 aa10.98□□□□□ -0.65
YBX3-211ENST00000541351 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.98□□□□□ -0.65
YBX3-211ENST00000541351 MYH7P12883 1935 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 KAT6AQ92794 2004 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 KANSL1LA0AUZ9 987 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 MBLAC1A4D2B0 266 aaPredicted RBP10.97□□□□□ -0.65
YBX3-211ENST00000541351 RNF113AO15541 343 aaKnown RBP10.97□□□□□ -0.65
YBX3-211ENST00000541351 NMT2O60551 498 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 ALDH7A1P49419 539 aaKnown RBP10.97□□□□□ -0.65
YBX3-211ENST00000541351 GATMP50440 423 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 PRKCQQ04759 706 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 NFX1Q12986 1120 aaKnown RBP10.97□□□□□ -0.65
YBX3-211ENST00000541351 CDC37Q16543 378 aaPredicted RBP10.97□□□□□ -0.65
YBX3-211ENST00000541351 UTP14CQ5TAP6 766 aaKnown RBP10.97□□□□□ -0.65
YBX3-211ENST00000541351 N4BP2L1Q5TBK1 243 aaPredicted RBP10.97□□□□□ -0.65
YBX3-211ENST00000541351 ZKSCAN2Q63HK3 967 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 RSPO2Q6UXX9 243 aaPredicted RBP10.97□□□□□ -0.65
YBX3-211ENST00000541351 PRR23CQ6ZRP0 262 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 MAML2Q8IZL2 1156 aaPredicted RBP10.97□□□□□ -0.65
YBX3-211ENST00000541351 NME8Q8N427 588 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 SLC44A3Q8N4M1 653 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 TTC14Q96N46 770 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 NELL2Q99435 816 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 TMEM47Q9BQJ4 181 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 BCL11AQ9H165 835 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 CWH43Q9H720 699 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 IGSF5Q9NSI5 407 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 SEMA4GQ9NTN9 838 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 EPS15L1Q9UBC2 864 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 IRAK3Q9Y616 596 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 CACNA1IQ9P0X4 2223 aa10.97□□□□□ -0.65
YBX3-211ENST00000541351 KDM3AQ9Y4C1 1321 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 GPR182O15218 404 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 LIMK1P53667 647 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 POLGP54098 1239 aaPredicted RBP10.96□□□□□ -0.65
YBX3-211ENST00000541351 SP2Q02086 613 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 PGM5Q15124 567 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 FAM102BQ5T8I3 360 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 CEP85Q6P2H3 762 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 STOX1Q6ZVD7 989 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 CYFIP1Q7L576 1253 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 TRMT2AQ8IZ69 625 aaKnown RBP10.96□□□□□ -0.65
YBX3-211ENST00000541351 KBTBD3Q8NAB2 608 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 OSBP2Q969R2 916 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 GPATCH3Q96I76 525 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 KLHL5Q96PQ7 755 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 ADAM2Q99965 735 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 MYL10Q9BUA6 226 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 EMILIN2Q9BXX0 1053 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 MRPL9Q9BYD2 267 aaKnown RBP10.96□□□□□ -0.65
YBX3-211ENST00000541351 CELF4Q9BZC1 486 aaKnown RBP10.96□□□□□ -0.65
YBX3-211ENST00000541351 FAM49AQ9H0Q0 323 aaPredicted RBP10.96□□□□□ -0.65
YBX3-211ENST00000541351 PARD6AQ9NPB6 346 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 RGS18Q9NS28 235 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 TOMM22Q9NS69 142 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 TCP11L1Q9NUJ3 509 aa10.96□□□□□ -0.65
YBX3-211ENST00000541351 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.96□□□□□ -0.65
YBX3-211ENST00000541351 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.96□□□□□ -0.65
YBX3-211ENST00000541351 CNOT1A5YKK6 2376 aaKnown RBP10.96□□□□□ -0.66
YBX3-211ENST00000541351 POTEMA6NI47 508 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 EIF4E1BA6NMX2 242 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms