RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PRAMEF19Q5SWL8 479 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 MFSD14CQ5VZR4 134 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 KLHL10Q6JEL2 608 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 TRMT44Q8IYL2 757 aaKnown RBP11.44□□□□□ -0.58
CHFR-219ENST00000541341 AENQ8WTP8 325 aaKnown RBP11.44□□□□□ -0.58
CHFR-219ENST00000541341 SYMPKQ92797 1274 aaKnown RBP11.44□□□□□ -0.58
CHFR-219ENST00000541341 CCDC17Q96LX7 622 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 CCDC42Q96M95 316 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 PURBQ96QR8 312 aaKnown RBP11.44□□□□□ -0.58
CHFR-219ENST00000541341 SH3GL2Q99962 352 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 SLF1Q9BQI6 1058 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 CTNND2Q9UQB3 1225 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 ATP11BQ9Y2G3 1177 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 RABGAP1Q9Y3P9 1069 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 IVNS1ABPQ9Y6Y0 642 aa11.44□□□□□ -0.58
CHFR-219ENST00000541341 GBF1Q92538 1859 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 PPFIA3O75145 1194 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 FSBPO95073 299 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 PARP1P09874 1014 aaKnown RBP11.43□□□□□ -0.58
CHFR-219ENST00000541341 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 TRIM21P19474 475 aaKnown RBP11.43□□□□□ -0.58
CHFR-219ENST00000541341 NOVP48745 357 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 GSCP56915 257 aaPredicted RBP11.43□□□□□ -0.58
CHFR-219ENST00000541341 CCNA1P78396 465 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 MTF1Q14872 753 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 CFAP221Q4G0U5 840 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 C10orf76Q5T2E6 689 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 CFAP58Q5T655 872 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 DPP9Q86TI2 863 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 SPICE1Q8N0Z3 855 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 MREGQ8N565 214 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 BCAS4Q8TDM0 211 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 C12orf42Q96LP6 360 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 ERGIC2Q96RQ1 377 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 JADE2Q9NQC1 790 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 PRDM5Q9NQX1 630 aaPredicted RBP11.43□□□□□ -0.58
CHFR-219ENST00000541341 GPHNQ9NQX3 736 aaPredicted RBP11.43□□□□□ -0.58
CHFR-219ENST00000541341 MTMR10Q9NXD2 777 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 DDX20Q9UHI6 824 aaKnown RBP11.43□□□□□ -0.58
CHFR-219ENST00000541341 SNX12Q9UMY4 172 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 PCDHB6Q9Y5E3 794 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 FAM169AQ9Y6X4 670 aa11.43□□□□□ -0.58
CHFR-219ENST00000541341 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 SLC15A5A6NIM6 579 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 CLGNO14967 610 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 CHUKO15111 745 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 RAD21O60216 631 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 CCDC172P0C7W6 258 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 STAT6P42226 847 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 AFMP43652 599 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 MNAT1P51948 309 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 RTP1P59025 263 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 GRB14Q14449 540 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 SLMAPQ14BN4 828 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 PPP2R5EQ16537 467 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 PPP4R3AQ6IN85 833 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 LRIG3Q6UXM1 1119 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 KDM7AQ6ZMT4 941 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 RUFY4Q6ZNE9 571 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 CNPY4Q8N129 248 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 ADSSL1Q8N142 457 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 NEDD1Q8NHV4 660 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 MAGEC3Q8TD91 643 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 GTF3C2Q8WUA4 911 aaPredicted RBP11.42□□□□□ -0.58
CHFR-219ENST00000541341 LBHD1Q9BQE6 289 aaPredicted RBP11.42□□□□□ -0.58
CHFR-219ENST00000541341 MOV10L1Q9BXT6 1211 aaKnown RBP11.42□□□□□ -0.58
CHFR-219ENST00000541341 CCSER1Q9C0I3 900 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 KIAA1683Q9H0B3 1180 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 EPC1Q9H2F5 836 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 MKNK2Q9HBH9 465 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 TCP11L1Q9NUJ3 509 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 STIM2Q9P246 746 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 LCMT1Q9UIC8 334 aa11.42□□□□□ -0.58
CHFR-219ENST00000541341 ATP8B3O60423 1300 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 NDUFAB1O14561 156 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 MEFVO15553 781 aaPredicted RBP11.41□□□□□ -0.58
CHFR-219ENST00000541341 PRDM1O75626 825 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 RHOBTB3O94955 611 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 LCA5LO95447 670 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 ADORA2AP29274 412 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 GGCXP38435 758 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 GOLGA8FQ08AF8 430 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 GOLGA8DPQ0D2H9 430 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 BIRC3Q13489 604 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 MTMR3Q13615 1198 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 LRIT3Q3SXY7 679 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 SPDYCQ5MJ68 293 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 CNNM4Q6P4Q7 775 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 PACS2Q86VP3 889 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 NCAPG2Q86XI2 1143 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 FMNL3Q8IVF7 1028 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 ZNF444Q8N0Y2 327 aaPredicted RBP11.41□□□□□ -0.58
CHFR-219ENST00000541341 PRPF38AQ8NAV1 312 aaKnown RBP11.41□□□□□ -0.58
CHFR-219ENST00000541341 ACRBPQ8NEB7 543 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 SYN2Q92777 582 aaPredicted RBP11.41□□□□□ -0.58
CHFR-219ENST00000541341 LRRC45Q96CN5 670 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 LZTS2Q9BRK4 669 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 IRX2Q9BZI1 471 aaPredicted RBP11.41□□□□□ -0.58
CHFR-219ENST00000541341 VPS16Q9H269 839 aa11.41□□□□□ -0.58
CHFR-219ENST00000541341 INCENPQ9NQS7 918 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms