RNA–Protein interactions for RNA: ENST00000541260.5

CCDC189-204, Transcript of coiled-coil domain containing 189, human

TSL 5 BASIC

Gene CCDC189, Length 1,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC189-204	ENST00000541260	RPAIN	Q86UA6	219 aa		18.9	■□□□□ 0.62
CCDC189-204	ENST00000541260	ZNF579	Q8NAF0	562 aa	Known RBP	18.9	■□□□□ 0.62
CCDC189-204	ENST00000541260	TRAPPC12	Q8WVT3	735 aa		18.9	■□□□□ 0.62
CCDC189-204	ENST00000541260	CLIC6	Q96NY7	704 aa		18.9	■□□□□ 0.62
CCDC189-204	ENST00000541260	CCSER1	Q9C0I3	900 aa		18.9	■□□□□ 0.62
CCDC189-204	ENST00000541260	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.9	■□□□□ 0.62
CCDC189-204	ENST00000541260	CYP26B1	Q9NR63	512 aa		18.9	■□□□□ 0.62
CCDC189-204	ENST00000541260	PCDHA2	Q9Y5H9	948 aa		18.9	■□□□□ 0.62
CCDC189-204	ENST00000541260	KAT6A	Q92794	2004 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	DNAH12	Q6ZR08	3092 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	TRIM43B	A6NCK2	446 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	PITPNM1	O00562	1244 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	ZBTB39	O15060	712 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	C22orf31	O95567	290 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	RPLP2	P05387	115 aa	Known RBP	18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	POTEG	Q6S5H5	508 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	CAGE1	Q8TC20	777 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	DHX38	Q92620	1227 aa	Known RBP	18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	NOC4L	Q9BVI4	516 aa	Known RBP	18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	NT5C3A	Q9H0P0	336 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	PRKAG2	Q9UGJ0	569 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	DBR1	Q9UK59	544 aa	Known RBP	18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	KIAA1024	Q9UPX6	916 aa		18.89	■□□□□ 0.61
CCDC189-204	ENST00000541260	SMIM35	A0A1B0GVV1	85 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	TMEM150B	A6NC51	233 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	CUTA	O60888	179 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	TBC1D8B	Q0IIM8	1120 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	TRIM71	Q2Q1W2	868 aa	Known RBP	18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	MTERF2	Q49AM1	385 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	CABP7	Q86V35	215 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	EXOC8	Q8IYI6	725 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	CCDC155	Q8N6L0	562 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	LEO1	Q8WVC0	666 aa	Predicted RBP	18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	CHAMP1	Q96JM3	812 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	CEP170P1	Q96L14	293 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	SPATA32	Q96LK8	384 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	HIPK3	Q9H422	1215 aa		18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.88	■□□□□ 0.61
CCDC189-204	ENST00000541260	IGKV6-21	A0A0C4DH24	114 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	CAND2	O75155	1236 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	TIMP1	P01033	207 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	NCL	P19338	710 aa	Known RBP	18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	RARRES1	P49788	294 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	NPEPPS	P55786	919 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	GRB10	Q13322	594 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	BFSP2	Q13515	415 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	PLA2G4F	Q68DD2	849 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	LINC01465	Q8N7H1	131 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	PIGO	Q8TEQ8	1089 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	WNT8B	Q93098	351 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	PNMA5	Q96PV4	448 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	DDX19A	Q9NUU7	478 aa	Known RBP	18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	PCDHA7	Q9UN72	937 aa		18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	TRIP12	Q14669	1992 aa	Predicted RBP	18.87	■□□□□ 0.61
CCDC189-204	ENST00000541260	MAF	O75444	373 aa	Predicted RBP	18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	TMEM119	Q4V9L6	283 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	XKR9	Q5GH70	373 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	RUFY4	Q6ZNE9	571 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	USP49	Q70CQ1	688 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	NME8	Q8N427	588 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	RETREG2	Q8NC44	543 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	SYMPK	Q92797	1274 aa	Known RBP	18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	CALML4	Q96GE6	196 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	EPSTI1	Q96J88	318 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	JPH2	Q9BR39	696 aa	Predicted RBP	18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	SH2D3A	Q9BRG2	576 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	DHX33	Q9H6R0	707 aa	Known RBP	18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	DNM3	Q9UQ16	869 aa		18.86	■□□□□ 0.61
CCDC189-204	ENST00000541260	RAG1	P15918	1043 aa		18.85	■□□□□ 0.61
CCDC189-204	ENST00000541260	ITGB8	P26012	769 aa		18.85	■□□□□ 0.61
CCDC189-204	ENST00000541260	RFC5	P40937	340 aa		18.85	■□□□□ 0.61
CCDC189-204	ENST00000541260	ME1	P48163	572 aa		18.85	■□□□□ 0.61
CCDC189-204	ENST00000541260	SPECC1	Q5M775	1068 aa		18.85	■□□□□ 0.61
CCDC189-204	ENST00000541260	RSPH3	Q86UC2	560 aa		18.85	■□□□□ 0.61
CCDC189-204	ENST00000541260	ZBTB10	Q96DT7	871 aa		18.85	■□□□□ 0.61
CCDC189-204	ENST00000541260	CDK5RAP3	Q96JB5	506 aa		18.85	■□□□□ 0.61
CCDC189-204	ENST00000541260	DGAT1	O75907	488 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	EYA4	O95677	639 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	CKB	P12277	381 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	TMOD1	P28289	359 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	TXLNA	P40222	546 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	EFCAB12	Q6NXP0	572 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	KIAA0319L	Q8IZA0	1049 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	DNAJB3	Q8WWF6	145 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	SLC7A3	Q8WY07	619 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	PPP1R12C	Q9BZL4	782 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	CCDC39	Q9UFE4	941 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260		A0A087WWV3	80 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260		E9PMD0	336 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	GAS2	O43903	313 aa	Known RBP	18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	SELP	P16109	830 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	SYN1	P17600	705 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	THPO	P40225	353 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	POLG	P54098	1239 aa	Predicted RBP	18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	ADAL	Q6DHV7	355 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	MFSD5	Q6N075	450 aa		18.84	■□□□□ 0.61
CCDC189-204	ENST00000541260	SHC4	Q6S5L8	630 aa		18.84	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms