RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 USP17L3A6NCW0 530 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 USP17L4A6NCW7 530 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 TMEM232C9JQI7 657 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 PPP1R12BO60237 982 aaPredicted RBP9.65□□□□□ -0.87
TCF4-207ENST00000540999 TSPAN1O60635 241 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 GUCY1A2P33402 732 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 NFIAQ12857 509 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 INO80DQ53TQ3 878 aaPredicted RBP9.65□□□□□ -0.87
TCF4-207ENST00000540999 APOBEC3HQ6NTF7 200 aaKnown RBP9.65□□□□□ -0.87
TCF4-207ENST00000540999 CAVIN1Q6NZI2 390 aaKnown RBP9.65□□□□□ -0.87
TCF4-207ENST00000540999 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 ZNF654Q8IZM8 581 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 TEX19Q8NA77 164 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 RBM14Q96PK6 669 aaKnown RBP9.65□□□□□ -0.87
TCF4-207ENST00000540999 NSRP1Q9H0G5 558 aaKnown RBP9.65□□□□□ -0.87
TCF4-207ENST00000540999 IL17RBQ9NRM6 502 aa9.65□□□□□ -0.87
TCF4-207ENST00000540999 TYW1Q9NV66 732 aaKnown RBP9.65□□□□□ -0.87
TCF4-207ENST00000540999 CCDC163A0A0D9SF12 145 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 hCG_1642624A0A1W2PR95 340 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 TSPY2A6NKD2 308 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 AKR1B15C9JRZ8 316 aaPredicted RBP9.64□□□□□ -0.87
TCF4-207ENST00000540999 NEMFO60524 1076 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 ZBED4O75132 1171 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 BPNT1O95861 308 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 PLA2G4AP47712 749 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 TFAP4Q01664 338 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 CEBPZQ03701 1054 aaKnown RBP9.64□□□□□ -0.87
TCF4-207ENST00000540999 RESTQ13127 1097 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 COG2Q14746 738 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 RNF187Q5TA31 235 aaPredicted RBP9.64□□□□□ -0.87
TCF4-207ENST00000540999 ZNF746Q6NUN9 644 aaPredicted RBP9.64□□□□□ -0.87
TCF4-207ENST00000540999 ARHGEF18Q6ZSZ5 1173 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 ZFPM1Q8IX07 1006 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 MAB21L3Q8N8X9 362 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
TCF4-207ENST00000540999 ABCF3Q9NUQ8 709 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 USP40Q9NVE5 1235 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 PFDN2Q9UHV9 154 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 KIAA1257Q9ULG3 409 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 PRKAB1Q9Y478 270 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 ECM29Q5VYK3 1845 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 RAD17O75943 681 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 ATP5DP30049 168 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 CRKP46108 304 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 KLHL40Q2TBA0 621 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 IFIT1BQ5T764 474 aaKnown RBP9.64□□□□□ -0.87
TCF4-207ENST00000540999 CDC42EP5Q6NZY7 148 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 CCDC121Q6ZUS5 278 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 KIAA1524Q8TCG1 905 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 ZFAND2BQ8WV99 257 aa9.64□□□□□ -0.87
TCF4-207ENST00000540999 MRPS23Q9Y3D9 190 aaKnown RBP9.64□□□□□ -0.87
TCF4-207ENST00000540999 MAGED1Q9Y5V3 778 aaPredicted RBP9.64□□□□□ -0.87
TCF4-207ENST00000540999 DDX60LQ5H9U9 1706 aaKnown RBP9.63□□□□□ -0.87
TCF4-207ENST00000540999 RGS20O76081 388 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 SLC4A1P02730 911 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 FUT4P22083 530 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 SMTNP53814 917 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 PMS2P54278 862 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 MAP7Q14244 749 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 BRD3Q15059 726 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 STRIP1Q5VSL9 837 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 FBXO38Q6PIJ6 1188 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 TTC6Q86TZ1 520 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 FANCBQ8NB91 859 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 UPF1Q92900 1129 aaKnown RBP eCLIP9.63□□□□□ -0.87
TCF4-207ENST00000540999 CABS1Q96KC9 395 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 NR1H4Q96RI1 486 aaPredicted RBP9.63□□□□□ -0.87
TCF4-207ENST00000540999 SLC26A6Q9BXS9 759 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 MKNK2Q9HBH9 465 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 CCPG1Q9ULG6 757 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 TARSL2A2RTX5 802 aaKnown RBP9.63□□□□□ -0.87
TCF4-207ENST00000540999 A6NJY4 79 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 TBC1D12O60347 775 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 BCRP11274 1271 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 FERP16591 822 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 TMOD1P28289 359 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 CDC25CP30307 473 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 TCP10Q12799 353 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 IKQ13123 557 aaPredicted RBP9.63□□□□□ -0.87
TCF4-207ENST00000540999 RTN1Q16799 776 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 ZC3H12BQ5HYM0 836 aaKnown RBP9.63□□□□□ -0.87
TCF4-207ENST00000540999 WDR44Q5JSH3 913 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 LDLRAD1Q5T700 205 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 USP38Q8NB14 1042 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 GLMNQ92990 594 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 MTFR1LQ9H019 292 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 PAPOLBQ9NRJ5 636 aaKnown RBP9.63□□□□□ -0.87
TCF4-207ENST00000540999 PHF24Q9UPV7 400 aa9.63□□□□□ -0.87
TCF4-207ENST00000540999 FOCADQ5VW36 1801 aa9.62□□□□□ -0.87
TCF4-207ENST00000540999 KIF13BQ9NQT8 1826 aa9.62□□□□□ -0.87
TCF4-207ENST00000540999 KIF28PB7ZC32 967 aa9.62□□□□□ -0.87
TCF4-207ENST00000540999 PLEKHA8P1O95397 391 aa9.62□□□□□ -0.87
TCF4-207ENST00000540999 SLC3A2P08195 630 aaKnown RBP9.62□□□□□ -0.87
TCF4-207ENST00000540999 IDO1P14902 403 aa9.62□□□□□ -0.87
TCF4-207ENST00000540999 RASA1P20936 1047 aa9.62□□□□□ -0.87
TCF4-207ENST00000540999 IARSP41252 1262 aaKnown RBP9.62□□□□□ -0.87
TCF4-207ENST00000540999 LMAN1P49257 510 aa9.62□□□□□ -0.87
TCF4-207ENST00000540999 CDK8P49336 464 aa9.62□□□□□ -0.87
TCF4-207ENST00000540999 TROAPQ12815 778 aa9.62□□□□□ -0.87
TCF4-207ENST00000540999 ISM2Q6H9L7 571 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms