RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 AP1M1Q9BXS5 423 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 POLR3FQ9H1D9 316 aaPredicted RBP10.38□□□□□ -0.75
TTC39C-203ENST00000540918 KCNK9Q9NPC2 374 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 SLC9A2Q9UBY0 812 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 MRC1P22897 1456 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 YDJCA8MPS7 323 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 DAPK3O43293 454 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 PRPHP41219 470 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 TAF1CQ15572 869 aaPredicted RBP10.38□□□□□ -0.75
TTC39C-203ENST00000540918 CRY2Q49AN0 593 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 CFAP221Q4G0U5 840 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 EPC2Q52LR7 807 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 GOLGA5Q8TBA6 731 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 PDLIM2Q96JY6 352 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 MED10Q9BTT4 135 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 GOLPH3Q9H4A6 298 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
TTC39C-203ENST00000540918 RGL2O15211 777 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 CTNND1O60716 968 aaKnown RBP10.37□□□□□ -0.75
TTC39C-203ENST00000540918 CTSHP09668 335 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 CYP2C8P10632 490 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 NSFP46459 744 aaKnown RBP10.37□□□□□ -0.75
TTC39C-203ENST00000540918 STAT5BP51692 787 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 SETQ01105 290 aaPredicted RBP10.37□□□□□ -0.75
TTC39C-203ENST00000540918 PTK2Q05397 1052 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 ADCY1Q08828 1119 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 C2orf54Q08AI8 447 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 GJB7Q6PEY0 223 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 ZNF365Q70YC5 407 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 ADSSL1Q8N142 457 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 OTUD6BQ8N6M0 293 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 TRIM58Q8NG06 486 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 KRT12Q99456 494 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 DNAJC17Q9NVM6 304 aaKnown RBP10.37□□□□□ -0.75
TTC39C-203ENST00000540918 IKBKGQ9Y6K9 419 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 CAPN2P17655 700 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 SLC9A1P19634 815 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 CASP4P49662 377 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 PSMC5P62195 406 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 APBA1Q02410 837 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 GRB10Q13322 594 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 KIF22Q14807 665 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 TRIP13Q15645 432 aaPredicted RBP10.37□□□□□ -0.75
TTC39C-203ENST00000540918 UBL4BQ8N7F7 174 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 XXYLT1Q8NBI6 393 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.37□□□□□ -0.75
TTC39C-203ENST00000540918 SLIT3O75094 1523 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 ZNF233A6NK53 670 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 FAM86B1E9PN63 330 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 FAM86B2P0C5J1 330 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 BACE1P56817 501 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 KRT76Q01546 638 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 SCYL3Q8IZE3 742 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 RETREG2Q8NC44 543 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 GLIS3Q8NEA6 775 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 TRPM4Q8TD43 1214 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 RUSC1Q9BVN2 902 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 TMX2Q9Y320 296 aa10.37□□□□□ -0.75
TTC39C-203ENST00000540918 PVALEFA0A1B0GWK0 134 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 TGFB2P61812 414 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 GUCY2DQ02846 1103 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 TTC19Q6DKK2 380 aaPredicted RBP10.36□□□□□ -0.75
TTC39C-203ENST00000540918 KCNK18Q7Z418 384 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 GLYCTKQ8IVS8 523 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 LPAR1Q92633 364 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 TMEM206Q9H813 350 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 CWC15Q9P013 229 aaKnown RBP10.36□□□□□ -0.75
TTC39C-203ENST00000540918 RSPH14Q9UHP6 348 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 TUBE1Q9UJT0 475 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 EMSYQ7Z589 1322 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 EGFRP00533 1210 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 PMS1P54277 932 aaKnown RBP10.36□□□□□ -0.75
TTC39C-203ENST00000540918 SLC8A3P57103 927 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 HDLBPQ00341 1268 aaKnown RBP10.36□□□□□ -0.75
TTC39C-203ENST00000540918 PSMD2Q13200 908 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 PPP2R5AQ15172 486 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 HAUS1Q96CS2 278 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 WDR24Q96S15 920 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 ATP6V0A4Q9HBG4 840 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 RASAL2Q9UJF2 1139 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 PCDHA13Q9Y5I0 950 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 CD2APQ9Y5K6 639 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 IQCA1LA6NCM1 817 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 TNPO2O14787 897 aaKnown RBP10.36□□□□□ -0.75
TTC39C-203ENST00000540918 ADAMTS3O15072 1205 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 MYL1P05976 194 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 EPHX2P34913 555 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 PDIA5Q14554 519 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 EPHA7Q15375 998 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 CDO1Q16878 200 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 ZNF568Q3ZCX4 644 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 SPDYE2Q495Y8 402 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 SARM1Q6SZW1 724 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 EP400NLQ6ZTU2 488 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 GUF1Q8N442 669 aaKnown RBP10.36□□□□□ -0.75
TTC39C-203ENST00000540918 PI4K2AQ9BTU6 479 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 NACA2Q9H009 215 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 RIOX1Q9H6W3 641 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms