RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PES1O00541 588 aaKnown RBP13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 MFAP3LO75121 409 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 STAM2O75886 525 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 CETPP11597 493 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 GAP43P17677 238 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 GTF2A2P52657 109 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 FKBP1BP68106 108 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 KNOP1Q1ED39 458 aaKnown RBP13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 GNPTABQ3T906 1256 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 FOXR2Q6PJQ5 311 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 C2orf69Q8N8R5 385 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 TSG101Q99816 390 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 TRMT1Q9NXH9 659 aaKnown RBP13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 SYNGAP1Q96PV0 1343 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 AKR1B15C9JRZ8 316 aaPredicted RBP13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 OFD1O75665 1012 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 FKBP3Q00688 224 aaKnown RBP13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 MTF1Q14872 753 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 SYCP1Q15431 976 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 LY6KQ17RY6 165 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 XKR9Q5GH70 373 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 ZNF720Q7Z2F6 126 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 FAM114A1Q8IWE2 563 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 FBXO16Q8IX29 292 aaPredicted RBP13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 RDM1Q8NG50 284 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 PCYT2Q99447 389 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 STRA6Q9BX79 667 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 ODF2LQ9ULJ1 636 aa13.55□□□□□ -0.24
AP003559.1-201ENST00000540906 TRPM7Q96QT4 1865 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 GSTTP1A0A1W2PQM5 241 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 EPHB6O15197 1021 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 CLIC2O15247 247 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 PPP1R37O75864 691 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 FARP2O94887 1054 aaPredicted RBP13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 SUPT20HL2P0C7V6 817 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 CASP4P49662 377 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 PRKCEQ02156 737 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 KCTD2Q14681 263 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 VWA3BQ502W6 1294 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 ODR4Q5SWX8 454 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 ANKRD23Q86SG2 305 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 SMAP1Q8IYB5 467 aaPredicted RBP13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 CCAR2Q8N163 923 aaKnown RBP13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 SMCR8Q8TEV9 937 aaPredicted RBP13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 BSNDQ8WZ55 320 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 CDHR1Q96JP9 859 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 KCND2Q9NZV8 630 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 PLXNA1Q9UIW2 1896 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 IGSF9BQ9UPX0 1349 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 TRAF3IP3Q9Y228 551 aa13.54□□□□□ -0.24
AP003559.1-201ENST00000540906 TTC26A0AVF1 554 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 TISP43B9A030 160 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 ATG7O95352 703 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 PSAPP07602 524 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 NR2F2P24468 414 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 DNM2P50570 870 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 TBC1D8BQ0IIM8 1120 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 ADAM9Q13443 819 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 EDRF1Q3B7T1 1238 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 PPFIBP1Q86W92 1011 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 FAM178BQ8IXR5 827 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 SHCBP1Q8NEM2 672 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 GPRC5AQ8NFJ5 357 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 COPS5Q92905 334 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 CEP63Q96MT8 703 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 TTYH3Q9C0H2 523 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 NDST4Q9H3R1 872 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 MROH8Q9H579 483 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 XPNPEP1Q9NQW7 623 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 PDGFCQ9NRA1 345 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 ANKEF1Q9NU02 776 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 PNMA3Q9UL41 463 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 SIK3Q9Y2K2 1263 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 MYH9P35579 1960 aaKnown RBP13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 A0A1W2PQC6 194 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 SOWAHDA6NJG2 315 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 EIF3DO15371 548 aaKnown RBP eCLIP13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 NR3C1P04150 777 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 HUNKP57058 714 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 MAN2A1Q16706 1144 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 RAD9BQ6WBX8 426 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 TOGARAM2Q6ZUX3 1019 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 TRIM59Q8IWR1 403 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 BAG1Q99933 345 aaPredicted RBP13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 KIFC3Q9BVG8 833 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 TYW1Q9NV66 732 aaKnown RBP13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 SLC45A1Q9Y2W3 748 aa13.53□□□□□ -0.24
AP003559.1-201ENST00000540906 PDXKO00764 312 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 AKAP3O75969 853 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 ECM2O94769 699 aaPredicted RBP13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 TOMM70O94826 608 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 GGPS1O95749 300 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 COPB2P35606 906 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 APBA1Q02410 837 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 CCDC40Q4G0X9 1142 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms