RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PRKAB2O43741 272 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 MYL3P08590 195 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 FURINP09958 794 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 SELPP16109 830 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 ATP8B2P98198 1209 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 DNM1Q05193 864 aaKnown RBP5.48□□□□□ -1.53
SNHG1-214ENST00000540865 RBL2Q08999 1139 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 IKBKEQ14164 716 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 GPNMBQ14956 572 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 PWP2Q15269 919 aaKnown RBP5.48□□□□□ -1.53
SNHG1-214ENST00000540865 TRIP4Q15650 581 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-214ENST00000540865 TCEAL5Q5H9L2 206 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 TMEM63BQ5T3F8 832 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 LRRC8DQ7L1W4 858 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 EEPD1Q7L9B9 569 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 KRT25Q7Z3Z0 450 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 RPAP2Q8IXW5 612 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-214ENST00000540865 FBXL6Q8N531 539 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 EDEM1Q92611 657 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 MKL1Q969V6 931 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 ACDQ96AP0 544 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 C17orf80Q9BSJ5 609 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 WDR11Q9BZH6 1224 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 NSUN3Q9H649 340 aaKnown RBP5.48□□□□□ -1.53
SNHG1-214ENST00000540865 ARMT1Q9H993 441 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 ALG13Q9NP73 1137 aaKnown RBP5.48□□□□□ -1.53
SNHG1-214ENST00000540865 HOMER2Q9NSB8 354 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 RNF146Q9NTX7 359 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 CYP39A1Q9NYL5 469 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 EGFL7Q9UHF1 273 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 VPS13AQ96RL7 3174 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 CHD8Q9HCK8 2581 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 CACNA1GO43497 2377 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 RAD50Q92878 1312 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 TECTAO75443 2155 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 NCOR2Q9Y618 2525 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 CACNA1BQ00975 2339 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 CYP2D7A0A087X1C5 515 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 A6NHS1 94 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 H3BNC9 293 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 STXBP3O00186 592 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 NKRFO15226 690 aaKnown RBP eCLIP5.47□□□□□ -1.53
SNHG1-214ENST00000540865 IPO8O15397 1037 aaKnown RBP5.47□□□□□ -1.53
SNHG1-214ENST00000540865 FZD6O60353 706 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 NBNO60934 754 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 FAM13AO94988 1023 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 MBD4O95243 580 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 NPR3P17342 541 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 LTBRP36941 435 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 PCBP4P57723 403 aaKnown RBP5.47□□□□□ -1.53
SNHG1-214ENST00000540865 HTRA4P83105 476 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-214ENST00000540865 ARHGAP4P98171 946 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 SPEM2Q0P670 501 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 PTGISQ16647 500 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 EPC2Q52LR7 807 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 CTR9Q6PD62 1173 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 EP400NLQ6ZTU2 488 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 FAM160B2Q86V87 743 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 SESTD1Q86VW0 696 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 TRMT2AQ8IZ69 625 aaKnown RBP5.47□□□□□ -1.53
SNHG1-214ENST00000540865 FAM9BQ8IZU0 186 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 GMCL1P1Q8NEA9 526 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 OR6J1Q8NGC5 347 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 CHURC1Q8WUH1 139 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 ATOH1Q92858 354 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-214ENST00000540865 CTAGE1Q96RT6 745 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 FAM86C1Q9NVL1 165 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 CLDND1Q9NY35 253 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 CLIP2Q9UDT6 1046 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 KCNMB2Q9Y691 235 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 DDX49Q9Y6V7 483 aaKnown RBP5.47□□□□□ -1.53
SNHG1-214ENST00000540865 ZBED9Q6R2W3 1325 aa5.47□□□□□ -1.53
SNHG1-214ENST00000540865 MYH1P12882 1939 aa5.46□□□□□ -1.53
SNHG1-214ENST00000540865 GBF1Q92538 1859 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 CDK5RAP2Q96SN8 1893 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 IGKV6D-41A0A0C4DH26 115 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 KRBA1A5PL33 1030 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 TMEM232C9JQI7 657 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 GOLIM4O00461 696 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 MBTPS2O43462 519 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 BCAR3O75815 825 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 SASH3O75995 380 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 AMHP03971 560 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 CKBP12277 381 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 BMP3P12645 472 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 ALAS1P13196 640 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 TARSP26639 723 aaKnown RBP5.46□□□□□ -1.54
SNHG1-214ENST00000540865 ADD2P35612 726 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 ID4P47928 161 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 STAT2P52630 851 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 RARSP54136 660 aaKnown RBP5.46□□□□□ -1.54
SNHG1-214ENST00000540865 ZXDAP98168 799 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 SMAD4Q13485 552 aaKnown RBP5.46□□□□□ -1.54
SNHG1-214ENST00000540865 GPM6BQ13491 265 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 LAMC2Q13753 1193 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 TCTN1Q2MV58 587 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 SBK1Q52WX2 424 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 SLFN13Q68D06 897 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 FAM117BQ6P1L5 589 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 RPAINQ86UA6 219 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms