RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 SORBS3O60504 671 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 SLITRK3O94933 977 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 HMGCRP04035 888 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 PLA2G4BP0C869 781 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 SFNP31947 248 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 JAK3P52333 1124 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 UGCGQ16739 394 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 MIER3Q7Z3K6 550 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 SMAP1Q8IYB5 467 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-204ENST00000540846 KIAA0895Q8NCT3 520 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 DDX12PQ92771 950 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 LENG1Q96BZ8 264 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-204ENST00000540846 DNAJC19Q96DA6 116 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 CTAGE1Q96RT6 745 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 MAPK8IP1Q9UQF2 711 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 TRIM17Q9Y577 477 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 PTCH2Q9Y6C5 1203 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 E9PMD0 336 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 HOXD8P13378 290 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-204ENST00000540846 STK4Q13043 487 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 ARID5BQ14865 1188 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 NR1I3Q14994 352 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 ARHGEF6Q15052 776 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 TPD52L1Q16890 204 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-204ENST00000540846 MFSD14CQ5VZR4 134 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 TTI2Q6NXR4 508 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 CCDC60Q8IWA6 550 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-204ENST00000540846 NOC3LQ8WTT2 800 aaKnown RBP13.84□□□□□ -0.19
SMAD3-204ENST00000540846 DYDC2Q96IM9 177 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 PCYT2Q99447 389 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 GPR20Q99678 358 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 TUFT1Q9NNX1 390 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 LIMA1Q9UHB6 759 aaKnown RBP13.84□□□□□ -0.19
SMAD3-204ENST00000540846 IGSF9BQ9UPX0 1349 aa13.84□□□□□ -0.19
SMAD3-204ENST00000540846 BICDL2A1A5D9 508 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 NKRFO15226 690 aaKnown RBP eCLIP13.83□□□□□ -0.195e-6■□□□□ 8.8
SMAD3-204ENST00000540846 ZNF862O60290 1169 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 GH1P01241 217 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 SUPT20HL2P0C7V6 817 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 HSPA1AP0DMV8 641 aaKnown RBP13.83□□□□□ -0.19
SMAD3-204ENST00000540846 HSPA1BP0DMV9 641 aaKnown RBP13.83□□□□□ -0.19
SMAD3-204ENST00000540846 CCNE1P24864 410 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 PMS1P54277 932 aaKnown RBP13.83□□□□□ -0.19
SMAD3-204ENST00000540846 CCZ1BP86790 482 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 CCZ1P86791 482 aaPredicted RBP13.83□□□□□ -0.19
SMAD3-204ENST00000540846 SP4Q02446 784 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 CYP4A11Q02928 519 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 TNFAIP2Q03169 654 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 PSMD2Q13200 908 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 ARMCX5Q6P1M9 558 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 DYMQ7RTS9 669 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 DHX37Q8IY37 1157 aaKnown RBP13.83□□□□□ -0.19
SMAD3-204ENST00000540846 RAET1EQ8TD07 263 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 NEK9Q8TD19 979 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 P2RX5Q93086 422 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 THAP9Q9H5L6 903 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 PTPN22Q9Y2R2 807 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 PCDHA10Q9Y5I2 948 aa13.83□□□□□ -0.19
SMAD3-204ENST00000540846 TRIM49BA6NDI0 452 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 STBD1O95210 358 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 LYPLA2O95372 231 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
SMAD3-204ENST00000540846 CYP11B2P19099 503 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 MUTP22033 750 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.21e-6■■■□□ 16.5
SMAD3-204ENST00000540846 CCND3P30281 292 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-204ENST00000540846 SLC12A3P55017 1021 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 PSMC6P62333 389 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 COASYQ13057 564 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 TBX2Q13207 712 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-204ENST00000540846 CTTNQ14247 550 aaKnown RBP13.83□□□□□ -0.2
SMAD3-204ENST00000540846 SPECC1LQ69YQ0 1117 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 FOXR2Q6PJQ5 311 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 GPBP1Q86WP2 473 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 IRF2BP1Q8IU81 584 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 GUF1Q8N442 669 aaKnown RBP13.83□□□□□ -0.2
SMAD3-204ENST00000540846 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 BANK1Q8NDB2 785 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 ANKRD20A12PQ8NF67 263 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 PPTC7Q8NI37 304 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 LXNQ9BS40 222 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 MLXIPQ9HAP2 919 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 BMP2KQ9NSY1 1161 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-204ENST00000540846 BRCA2P51587 3418 aa13.83□□□□□ -0.2
SMAD3-204ENST00000540846 EMSYQ7Z589 1322 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 FRMD3A2A2Y4 597 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 LRRC10BA6NIK2 292 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 KCNJ18B7U540 433 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 SEPT4O43236 478 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 LGR5O75473 907 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 P4HBP07237 508 aaKnown RBP13.82□□□□□ -0.2
SMAD3-204ENST00000540846 AKR1A1P14550 325 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 IDEP14735 1019 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 GRK4P32298 578 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 TCF7P36402 384 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-204ENST00000540846 PBX1P40424 430 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-204ENST00000540846 LAMC2Q13753 1193 aa13.82□□□□□ -0.2
SMAD3-204ENST00000540846 KCNJ12Q14500 433 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms