RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 SEPT10Q9P0V9 454 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 GOLGA8IPA6NC78 632 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 GOLGA8JA6NMD2 632 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 TBX3O15119 743 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 DGAT1O75907 488 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 IL1R1P14778 569 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 SAMD3Q8N6K7 520 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 GDAQ9Y2T3 454 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 PAGE5Q96GU1 130 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 ERO1AQ96HE7 468 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 F8W8V4 182 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 POLR3GO15318 223 aaPredicted RBP15.39■□□□□ 0.05
COLCA1-204ENST00000540738 SLC16A4O15374 487 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 NDUFAF2Q8N183 169 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 ATP2A3Q93084 1043 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 EHD4Q9H223 541 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 ALDH8A1Q9H2A2 487 aaPredicted RBP15.39■□□□□ 0.05
COLCA1-204ENST00000540738 POTEB3A0JP26 581 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 YY1P25490 414 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
COLCA1-204ENST00000540738 GBP1P32455 592 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 ZNF699Q32M78 642 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 RNF219Q5W0B1 726 aaPredicted RBP15.39■□□□□ 0.05
COLCA1-204ENST00000540738 POTEBQ6S5H4 581 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 STAG2Q8N3U4 1231 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 ZNF653Q96CK0 615 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 RBSNQ9H1K0 784 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 GOLGA8SH3BPF8 625 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 SCARA5Q6ZMJ2 495 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 NUDT18Q6ZVK8 323 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 PCSK9Q8NBP7 692 aaKnown RBP15.39■□□□□ 0.05
COLCA1-204ENST00000540738 EPSTI1Q96J88 318 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 TTC1Q99614 292 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 EIF2AK1Q9BQI3 630 aaKnown RBP15.39■□□□□ 0.05
COLCA1-204ENST00000540738 IKBKBO14920 756 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 SLC26A4O43511 780 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 FKBP1AP62942 108 aaKnown RBP15.39■□□□□ 0.05
COLCA1-204ENST00000540738 LMNB2Q03252 620 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 SFR1Q86XK3 245 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 SCN4BQ8IWT1 228 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 ERAP1Q9NZ08 941 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 SAMD15Q9P1V8 674 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 PIN4Q9Y237 131 aaKnown RBP15.39■□□□□ 0.05
COLCA1-204ENST00000540738 RFC5P40937 340 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 RPGRIP1Q96KN7 1286 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 HAUS4Q9H6D7 363 aa15.39■□□□□ 0.05
COLCA1-204ENST00000540738 SUCLA2Q9P2R7 463 aaPredicted RBP15.39■□□□□ 0.05
COLCA1-204ENST00000540738 H7C0C1 242 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 PDHBP11177 359 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 ATP5OP48047 213 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 P3H4Q92791 437 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 GMNNO75496 209 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 INHBEP58166 350 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 SFI1A8K8P3 1242 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 POTECB2RU33 542 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 PROM2Q8N271 834 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 BBOF1Q8ND07 529 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 OPTNQ96CV9 577 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 RECQLP46063 649 aaPredicted RBP15.38■□□□□ 0.05
COLCA1-204ENST00000540738 SEMA3FQ13275 785 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 C4orf50Q6ZRC1 276 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 GANCQ8TET4 914 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 TRIM31Q9BZY9 425 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 ANAPC5Q9UJX4 755 aa15.38■□□□□ 0.05
COLCA1-204ENST00000540738 HEXIM1O94992 359 aaKnown RBP15.37■□□□□ 0.05
COLCA1-204ENST00000540738 ADKP55263 362 aaKnown RBP15.37■□□□□ 0.05
COLCA1-204ENST00000540738 KLHL7Q8IXQ5 586 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.37■□□□□ 0.05
COLCA1-204ENST00000540738 TRIM62Q9BVG3 475 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 MAN1B1Q9UKM7 699 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 E9PMD0 336 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 LRRN2O75325 713 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 CPB1P15086 417 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 LONRF3Q496Y0 759 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 RNF149Q8NC42 400 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 RUNDC3BQ96NL0 473 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 HBP1O60381 514 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 CDC27P30260 824 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 YWHABP31946 246 aaKnown RBP15.37■□□□□ 0.05
COLCA1-204ENST00000540738 MAN1A1P33908 653 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 PDIA5Q14554 519 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 RFX6Q8HWS3 928 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 AFG3L2Q9Y4W6 797 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 RPS6KA5O75582 802 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 EYA4O95677 639 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 TBXAS1P24557 533 aaPredicted RBP15.37■□□□□ 0.05
COLCA1-204ENST00000540738 NBPF9Q3BBW0 867 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 ANKS4BQ8N8V4 417 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 FBF1Q8TES7 1133 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 EFCC1Q9HA90 598 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 AAASQ9NRG9 546 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 STRIP2Q9ULQ0 834 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 SCAF8Q9UPN6 1271 aaKnown RBP15.37■□□□□ 0.05
COLCA1-204ENST00000540738 HYOU1Q9Y4L1 999 aa15.37■□□□□ 0.05
COLCA1-204ENST00000540738 PRPSAP2O60256 369 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 LARGE1O95461 756 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 TDP2O95551 362 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 PHBP35232 272 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 PAK2Q13177 524 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms