RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 GABBR1Q9UBS5 961 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 RCOR1Q9UKL0 485 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 CEP131Q9UPN4 1083 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 PCDHA11Q9Y5I1 949 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 B4GALT4O60513 344 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 MED24O75448 989 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 CABYRO75952 493 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 STBD1O95210 358 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 ATP2A2P16615 1042 aaKnown RBP18.74■□□□□ 0.59
UBC-208ENST00000540700 MARK3P27448 753 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
UBC-208ENST00000540700 SFNP31947 248 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 JAK3P52333 1124 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 HIC1Q14526 733 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 EPHA7Q15375 998 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 SPECC1Q5M775 1068 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 ATL3Q6DD88 541 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 MIS18BP1Q6P0N0 1132 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 USP49Q70CQ1 688 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 RDM1Q8NG50 284 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 AFAP1L1Q8TED9 768 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 LEO1Q8WVC0 666 aaPredicted RBP18.74■□□□□ 0.59
UBC-208ENST00000540700 DYDC2Q96IM9 177 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 EIF2AK1Q9BQI3 630 aaKnown RBP18.74■□□□□ 0.59
UBC-208ENST00000540700 MTG1Q9BT17 334 aaPredicted RBP18.74■□□□□ 0.59
UBC-208ENST00000540700 RNPEPQ9H4A4 650 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 SAMM50Q9Y512 469 aa18.74■□□□□ 0.59
UBC-208ENST00000540700 SRPRBQ9Y5M8 271 aaKnown RBP18.74■□□□□ 0.59
UBC-208ENST00000540700 MAFBQ9Y5Q3 323 aaPredicted RBP18.74■□□□□ 0.59
UBC-208ENST00000540700 PRRC2BQ5JSZ5 2229 aaKnown RBP18.74■□□□□ 0.59
UBC-208ENST00000540700 TMEM150BA6NC51 233 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 SPTLC2O15270 562 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 ZEB2O60315 1214 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 SLITRK3O94933 977 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 PSAPP07602 524 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 SPATA31C1P0DKV0 1188 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 PSEN2P49810 448 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 CYP4A11Q02928 519 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 CTTNQ14247 550 aaKnown RBP18.73■□□□□ 0.59
UBC-208ENST00000540700 PLCB4Q15147 1175 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 AXDND1Q5T1B0 1012 aaPredicted RBP18.73■□□□□ 0.59
UBC-208ENST00000540700 RPUSD2Q8IZ73 545 aaKnown RBP18.73■□□□□ 0.59
UBC-208ENST00000540700 LRRC15Q8TF66 581 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 HSD17B14Q9BPX1 270 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 CSRNP2Q9H175 543 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 ZNF302Q9NR11 478 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 SCN10AQ9Y5Y9 1956 aa18.73■□□□□ 0.59
UBC-208ENST00000540700 PIEZO1Q92508 2521 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 A0A087WWV3 80 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 H3BRB1 525 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 BACH1O14867 736 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 GTPBP6O43824 516 aaPredicted RBP18.72■□□□□ 0.59
UBC-208ENST00000540700 PPP6R2O75170 966 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 NCLP19338 710 aaKnown RBP18.72■□□□□ 0.59
UBC-208ENST00000540700 STAT5BP51692 787 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 KRT85P78386 507 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 PDIA5Q14554 519 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 MFSD10Q14728 455 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 KIAA0753Q2KHM9 967 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 TMEM266Q2M3C6 531 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 BRDTQ58F21 947 aaPredicted RBP18.72■□□□□ 0.59
UBC-208ENST00000540700 PLPPR4Q7Z2D5 763 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 LRFN3Q9BTN0 628 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 TUT1Q9H6E5 874 aaKnown RBP18.72■□□□□ 0.59
UBC-208ENST00000540700 LRWD1Q9UFC0 647 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 TCEAL9Q9UHQ7 104 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 PCDHA7Q9UN72 937 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 HCN4Q9Y3Q4 1203 aa18.72■□□□□ 0.59
UBC-208ENST00000540700 POTEB3A0JP26 581 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 RBAK-RBAKDNI3L0D1 243 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 ZBTB39O15060 712 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 KPNA6O60684 536 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 CA3P07451 260 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 NBPF20Q3BBV1 942 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 PDXDC2PQ6P474 469 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 POTEBQ6S5H4 581 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 DEFB128Q7Z7B8 93 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 CATSPER3Q86XQ3 398 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 GLG1Q92896 1179 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 EPSTI1Q96J88 318 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 LXNQ9BS40 222 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 SMARCAD1Q9H4L7 1026 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 CFAP45Q9UL16 551 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 ATP6V1DQ9Y5K8 247 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 MTCH2Q9Y6C9 303 aa18.71■□□□□ 0.59
UBC-208ENST00000540700 P4HBP07237 508 aaKnown RBP18.7■□□□□ 0.58
UBC-208ENST00000540700 CYP2C9P11712 490 aa18.7■□□□□ 0.58
UBC-208ENST00000540700 CHMP4BP1P59074 171 aa18.7■□□□□ 0.58
UBC-208ENST00000540700 PRKCEQ02156 737 aa18.7■□□□□ 0.58
UBC-208ENST00000540700 SHC4Q6S5L8 630 aa18.7■□□□□ 0.58
UBC-208ENST00000540700 TRMT1LQ7Z2T5 733 aaKnown RBP18.7■□□□□ 0.58
UBC-208ENST00000540700 KRI1Q8N9T8 703 aaKnown RBP18.7■□□□□ 0.58
UBC-208ENST00000540700 KCNG4Q8TDN1 519 aa18.7■□□□□ 0.58
UBC-208ENST00000540700 VWCEQ96DN2 955 aa18.7■□□□□ 0.58
UBC-208ENST00000540700 ZBTB10Q96DT7 871 aa18.7■□□□□ 0.58
UBC-208ENST00000540700 PNMA5Q96PV4 448 aa18.7■□□□□ 0.58
UBC-208ENST00000540700 TRMT13Q9NUP7 481 aaKnown RBP18.7■□□□□ 0.58
UBC-208ENST00000540700 GBF1Q92538 1859 aa18.69■□□□□ 0.58
UBC-208ENST00000540700 WDR81Q562E7 1941 aa18.69■□□□□ 0.58
UBC-208ENST00000540700 EPOPA6NHQ4 379 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms