RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 TSGA10IPQ3SY00 556 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 TTBK2Q6IQ55 1244 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 CES5AQ6NT32 575 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 BTNL9Q6UXG8 535 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 IQCA1Q86XH1 822 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 MB21D2Q8IYB1 491 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 IGDCC4Q8TDY8 1250 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 KCNB2Q92953 911 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 IWS1Q96ST2 819 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 SMOC2Q9H3U7 446 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 LIMD1Q9UGP4 676 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 CDV3Q9UKY7 258 aaKnown RBP10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 MTMR7Q9Y216 660 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 LAMA4Q16363 1823 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 TREHO43280 583 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 ASGR2P07307 311 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 GNAT1P11488 350 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 HSPA4P34932 840 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 LMNB2Q03252 620 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 DMWDQ09019 674 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 TRDNQ13061 729 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 ADCK5Q3MIX3 580 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 CCDC178Q5BJE1 867 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 SUMF1Q8NBK3 374 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 USP26Q9BXU7 913 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 ADAM7Q9H2U9 754 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 RNPEPQ9H4A4 650 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 CDHR5Q9HBB8 845 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 USTQ9Y2C2 406 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 PCDHB12Q9Y5F1 795 aa10.22□□□□□ -0.77
TRAPPC1-202ENST00000540486 GPR179Q6PRD1 2367 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 IFIT3O14879 490 aaKnown RBP10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 PPFIA3O75145 1194 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 SLC16A2P36021 539 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 MTHFRP42898 656 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 PTGDRQ13258 359 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 SYDE2Q5VT97 1194 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 CRIPAKQ8N1N5 446 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 PNMA1Q8ND90 353 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 NSUN6Q8TEA1 469 aaKnown RBP10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 DCAF4Q8WV16 495 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 POMKQ9H5K3 350 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 EHMT1Q9H9B1 1298 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 GPCPD1Q9NPB8 672 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 AAASQ9NRG9 546 aa10.21□□□□□ -0.77
TRAPPC1-202ENST00000540486 FRMPD2Q68DX3 1309 aaPredicted RBP10.21□□□□□ -0.78
TRAPPC1-202ENST00000540486 DCDC2BA2VCK2 349 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 H3BRB1 525 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 KINO60870 393 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 EIF3JO75822 258 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 SP9P0CG40 484 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 GOLGA8HP0CJ92 632 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 STAG3L1P0CL83 205 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 SMIM10L2AP0DMW4 78 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 SMIM10L2BP0DMW5 78 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 EXOSC10Q01780 885 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 ZNF543Q08ER8 600 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 TBC1D8BQ0IIM8 1120 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 MYSM1Q5VVJ2 828 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 KCNV1Q6PIU1 500 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 RALYLQ86SE5 291 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 TDRD5Q8NAT2 981 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 CASP10Q92851 521 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 SECISBP2LQ93073 1101 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 UBAC1Q9BSL1 405 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 C16orf70Q9BSU1 422 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 APOL5Q9BWW9 433 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 UBA5Q9GZZ9 404 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 CPVLQ9H3G5 476 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 TUT1Q9H6E5 874 aaKnown RBP10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 KAT14Q9H8E8 782 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 ERVK-5Q9HDB9 667 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 NCDNQ9UBB6 729 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 FBXL21Q9UKT6 434 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 SNX14Q9Y5W7 946 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 MRVI1Q9Y6F6 885 aa10.2□□□□□ -0.78
TRAPPC1-202ENST00000540486 TTC3P53804 2025 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 WDR19Q8NEZ3 1342 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 FSCN2O14926 492 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 EPB41L2O43491 1005 aaKnown RBP10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 PRC1O43663 620 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 REC8O95072 547 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 CHRNA1P02708 482 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 MCM5P33992 734 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 ERVFC1P60507 584 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 TROAPQ12815 778 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 TDGQ13569 410 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 CCDC96Q2M329 555 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 RNF20Q5VTR2 975 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 RUFY4Q6ZNE9 571 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 NPAS4Q8IUM7 802 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 SIX5Q8N196 739 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 STAG2Q8N3U4 1231 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 RIN2Q8WYP3 895 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 SPATA33Q96N06 139 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 MTA3Q9BTC8 594 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 FTHL17Q9BXU8 183 aa10.19□□□□□ -0.78
TRAPPC1-202ENST00000540486 LRRC2Q9BYS8 371 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms