RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 FOXD4L5Q5VV16 416 aaPredicted RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 ARL6IP4Q66PJ3 421 aaKnown RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 SERINC5Q86VE9 423 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 NEK9Q8TD19 979 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 TRAPPC12Q8WVT3 735 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 FOXD4L4Q8WXT5 416 aaPredicted RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 WNT8BQ93098 351 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 DYDC2Q96IM9 177 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 FAM167AQ96KS9 214 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 USP28Q96RU2 1077 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 HSD17B14Q9BPX1 270 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 EIF2AK1Q9BQI3 630 aaKnown RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 NOC4LQ9BVI4 516 aaKnown RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 HIPK3Q9H422 1215 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 TMEM39AQ9NV64 488 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 RGL1Q9NZL6 768 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 PRKAG2Q9UGJ0 569 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 TUBE1Q9UJT0 475 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 ZMYND8Q9ULU4 1186 aaPredicted RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 NOD1Q9Y239 953 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 ZDHHC9Q9Y397 364 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 CLIC4Q9Y696 253 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 TMEM150BA6NC51 233 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 VWA3AA6NCI4 1184 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 RRN3P2A6NIE6 340 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 PP2D1A8MPX8 630 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 H0YGN5 161 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 MED24O75448 989 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 SLITRK3O94933 977 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 LYPLA2O95372 231 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 C22orf31O95567 290 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 TIMP1P01033 207 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 SPATA31C1P0DKV0 1188 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 GNAT1P11488 350 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 NASPP49321 788 aaPredicted RBP7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 IGBP1P78318 339 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 CTTNQ14247 550 aaKnown RBP7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 PDIA5Q14554 519 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 TRIM71Q2Q1W2 868 aaKnown RBP7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 XKR3Q5GH77 459 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 ZNF484Q5JVG2 852 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 HAUS3Q68CZ6 603 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 DTHD1Q6ZMT9 781 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 RUFY4Q6ZNE9 571 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 ANO5Q75V66 913 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 C4orf19Q8IY42 314 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 CKAP2LQ8IYA6 745 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 CCDC155Q8N6L0 562 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 CAGE1Q8TC20 777 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 TNPO1Q92973 898 aaKnown RBP7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 ZBTB10Q96DT7 871 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 CEP89Q96ST8 783 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 RAB34Q9BZG1 259 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 PPP1R12CQ9BZL4 782 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 WNT8AQ9H1J5 351 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 TUFT1Q9NNX1 390 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 LRWD1Q9UFC0 647 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 SEPT9Q9UHD8 586 aaPredicted RBP7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 CEP131Q9UPN4 1083 aa7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 MORC2Q9Y6X9 1032 aaPredicted RBP7.82□□□□□ -1.16
LPCAT3-209ENST00000540060 TET1Q8NFU7 2136 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 RBAK-RBAKDNI3L0D1 243 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 DKC1O60832 514 aaKnown RBP eCLIP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 CAND2O75155 1236 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 CKBP12277 381 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 RAG1P15918 1043 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 RPA1P27694 616 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 YWHABP31946 246 aaKnown RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 CYP2C18P33260 490 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 CEBPZQ03701 1054 aaKnown RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 GRIN1Q05586 938 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 BFSP2Q13515 415 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 SLC39A14Q15043 492 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 TARBP2Q15633 366 aaKnown RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 PLA2G4FQ68DD2 849 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 TAF2Q6P1X5 1199 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 TRAF7Q6Q0C0 670 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 MTHFD1LQ6UB35 978 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 TRMT1LQ7Z2T5 733 aaKnown RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 CATSPER3Q86XQ3 398 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 TPH2Q8IWU9 490 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 LINC01465Q8N7H1 131 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 LINC00301Q8NCQ3 95 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 ERMNQ8TAM6 284 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 ZNF396Q96N95 335 aaPredicted RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 MMTAG2Q9BU76 263 aaKnown RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 POLR3CQ9BUI4 534 aaPredicted RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 NIFKQ9BYG3 293 aaKnown RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 ZSWIM4Q9H7M6 989 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 TSHZ2Q9NRE2 1034 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 NRBP2Q9NSY0 501 aa7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 FBXO2Q9UK22 296 aaPredicted RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 CIZ1Q9ULV3 898 aaPredicted RBP7.81□□□□□ -1.16
LPCAT3-209ENST00000540060 SMIM35A0A1B0GVV1 85 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 ZBTB39O15060 712 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 YEATS4O95619 227 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 SELPP16109 830 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 MUTP22033 750 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 KLRC1P26715 233 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 CDC25AP30304 524 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms