RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
CLSTN3-209ENST00000539982 LOXHD1Q8IVV2 1947 aa13.32□□□□□ -0.28
CLSTN3-209ENST00000539982 RIF1Q5UIP0 2472 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-209ENST00000539982 DENND3A2RUS2 1198 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 PRR23AA6NEV1 266 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 C9IYK1 514 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 RPS6KA5O75582 802 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 LAG3P18627 525 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 KLRC1P26715 233 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 KIF5BP33176 963 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 FAM189BP81408 668 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 MTMR3Q13615 1198 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 PLPP4Q5VZY2 271 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 LLGL2Q6P1M3 1020 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 CTCFLQ8NI51 663 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 IGDCC4Q8TDY8 1250 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 TCF25Q9BQ70 676 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 LZTS2Q9BRK4 669 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 IL25Q9H293 177 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 RWDD1Q9H446 243 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 CDHR5Q9HBB8 845 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 NGRNQ9NPE2 291 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 ST3GAL5Q9UNP4 418 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 SORCS3Q9UPU3 1222 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 FNDC1Q4ZHG4 1894 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 MYO15AQ9UKN7 3530 aa13.31□□□□□ -0.28
CLSTN3-209ENST00000539982 SPDYE3A6NKU9 549 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 HIDE1A8MVS5 230 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 GPR182O15218 404 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 BRD1O95696 1058 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 SP100P23497 879 aaPredicted RBP13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 SLC26A2P50443 739 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 ACTR2P61160 394 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 NUCB1Q02818 461 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 APOBRQ0VD83 1088 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 TPRNQ4KMQ1 711 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 CES5AQ6NT32 575 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 ERMP1Q7Z2K6 904 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 TMEM105Q8N8V8 129 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 CASP10Q92851 521 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 NECTIN4Q96NY8 510 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 ADAM7Q9H2U9 754 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 ELAC1Q9H777 363 aaKnown RBP13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 ATP6V0A4Q9HBG4 840 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 ENTPD7Q9NQZ7 604 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 TSHZ2Q9NRE2 1034 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 KCNH7Q9NS40 1196 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 TMEM161AQ9NX61 479 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 HCSTQ9UBK5 93 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 PCDHA6Q9UN73 950 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 GINS2Q9Y248 185 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 PCDHA8Q9Y5H6 950 aa13.3□□□□□ -0.28
CLSTN3-209ENST00000539982 MYO10Q9HD67 2058 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 E7EWF7 191 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 ATG7O95352 703 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 FGFR1P11362 822 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 PDE4AP27815 886 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 GNAQP50148 359 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 KRT17Q04695 432 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 ITIH3Q06033 890 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 ASTLQ6HA08 431 aaPredicted RBP13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 KIAA0319LQ8IZA0 1049 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 SRBD1Q8N5C6 995 aaKnown RBP13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 TMEM40Q8WWA1 233 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 MXRA8Q9BRK3 442 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 SDF4Q9BRK5 362 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 NFASCO94856 1347 aa13.29□□□□□ -0.28
CLSTN3-209ENST00000539982 FAM186AA6NE01 2351 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 C2CD4DB7Z1M9 353 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 HBP1O60381 514 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 DDAH1O94760 285 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 CLCN5P51795 746 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 ANTXR2P58335 489 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 AAMPQ13685 434 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 UBE2SQ16763 222 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 KCNT2Q6UVM3 1135 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 LRRC55Q6ZSA7 311 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 TMC7Q7Z402 723 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 ZNF654Q8IZM8 581 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 MRPL43Q8N983 215 aaKnown RBP13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 NKD2Q969F2 451 aaPredicted RBP13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 MYL10Q9BUA6 226 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 POMKQ9H5K3 350 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 TAF6LQ9Y6J9 622 aa13.28□□□□□ -0.28
CLSTN3-209ENST00000539982 IGKV6D-21A0A0A0MT36 114 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 HOXA2O43364 376 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 ARP10275 920 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 PPM1AP35813 382 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 MTHFRP42898 656 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 CRYBB1P53674 252 aaPredicted RBP13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 PTH1RQ03431 593 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 DSC3Q14574 896 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 FRMD5Q7Z6J6 570 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 CYP2W1Q8TAV3 490 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 ZNF558Q96NG5 402 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms