RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 NLRX1Q86UT6 975 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 FCHSD1Q86WN1 690 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 ADSSL1Q8N142 457 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 LMBR1Q8WVP7 490 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 DNAJB3Q8WWF6 145 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 SEPT1Q8WYJ6 367 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 MTMR8Q96EF0 704 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 NECTIN4Q96NY8 510 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 INPP4AQ96PE3 977 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-219ENST00000539952 S1PR5Q9H228 398 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 SEMA4AQ9H3S1 761 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 BCAS3Q9H6U6 928 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 GRPEL1Q9HAV7 217 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 ERAP1Q9NZ08 941 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 ZSWIM5Q9P217 1185 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 BARX2Q9UMQ3 279 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-219ENST00000539952 SORCS3Q9UPU3 1222 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 PCDHB7Q9Y5E2 793 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 MRPL42Q9Y6G3 142 aaKnown RBP6.84□□□□□ -1.31
CPSF7-219ENST00000539952 FAM186AA6NE01 2351 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 TTC3P53804 2025 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 MYH7BA7E2Y1 1941 aa6.84□□□□□ -1.32
CPSF7-219ENST00000539952 PNMA6FA0A0J9YX94 578 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 MBLAC1A4D2B0 266 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-219ENST00000539952 M0QZ92 97 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 OPLAHO14841 1288 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 MAFGO15525 162 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 GLP2RO95838 553 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 TPM2P07951 284 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 SCG2P13521 617 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 CD52P31358 61 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 MRPS9P82933 396 aaKnown RBP6.83□□□□□ -1.32
CPSF7-219ENST00000539952 ITIH3Q06033 890 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 CCDC173Q0VFZ6 552 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 PPFIA1Q13136 1202 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 HS1BP3Q53T59 392 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 C6orf132Q5T0Z8 1188 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 SPOUT1Q5T280 376 aaKnown RBP6.83□□□□□ -1.32
CPSF7-219ENST00000539952 CES5AQ6NT32 575 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 ANKRD54Q6NXT1 300 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 KREMEN2Q8NCW0 462 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 GPKOWQ92917 476 aaPredicted RBP eCLIP6.83□□□□□ -1.323e-7■■■■□ 21.6
CPSF7-219ENST00000539952 MARVELD3Q96A59 401 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 CDHR1Q96JP9 859 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 KRT23Q9C075 422 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 MFSD1Q9H3U5 465 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 SMARCAD1Q9H4L7 1026 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 NGRNQ9NPE2 291 aaKnown RBP6.83□□□□□ -1.32
CPSF7-219ENST00000539952 TMEM260Q9NX78 707 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 RTEL1Q9NZ71 1219 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 PADI3Q9ULW8 664 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 LZTS1Q9Y250 596 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 CDY2AQ9Y6F7 541 aa6.83□□□□□ -1.32
CPSF7-219ENST00000539952 KIAA1217Q5T5P2 1943 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 PALM3A6NDB9 673 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 ESPNB1AK53 854 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 FGF18O76093 207 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 CSPG5O95196 566 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 HOXB1P14653 301 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 DDIT3P35638 169 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 TCF7P36402 384 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 TECP42680 631 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 SARSP49591 514 aaKnown RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 ERVFC1P60507 584 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 NUCB2P80303 420 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 MRPS6P82932 125 aaKnown RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 PLCB3Q01970 1234 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 KRT17Q04695 432 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 KCNC3Q14003 757 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 BMS1Q14692 1282 aaKnown RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 GRIK4Q16099 956 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 PAN2Q504Q3 1202 aaKnown RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 IFIT1BQ5T764 474 aaKnown RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 RUFY4Q6ZNE9 571 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 CHD1LQ86WJ1 897 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 THNSL1Q8IYQ7 743 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 STAG2Q8N3U4 1231 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 ENAHQ8N8S7 591 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 IL31RAQ8NI17 732 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 CASP10Q92851 521 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 GLG1Q92896 1179 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 CUL5Q93034 780 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 ZDHHC16Q969W1 377 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 FAM227BQ96M60 508 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 RTP3Q9BQQ7 232 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 UBAC1Q9BSL1 405 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 REPIN1Q9BWE0 567 aaKnown RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 CELF4Q9BZC1 486 aaKnown RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 ADAM7Q9H2U9 754 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 RIOX1Q9H6W3 641 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 CNNM2Q9H8M5 875 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 AGO3Q9H9G7 860 aaKnown RBP6.82□□□□□ -1.32
CPSF7-219ENST00000539952 C1orf112Q9NSG2 853 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 TUBE1Q9UJT0 475 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 KAT6AQ92794 2004 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 ATRXP46100 2492 aa6.82□□□□□ -1.32
CPSF7-219ENST00000539952 MYO10Q9HD67 2058 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 RALGAPA2Q2PPJ7 1873 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 KDM3AQ9Y4C1 1321 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 WDFY4Q6ZS81 3184 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms