RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PPP1R9AQ9ULJ8 1098 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 ARHGEF40Q8TER5 1519 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 TULP4Q9NRJ4 1543 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 MED14O60244 1454 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 UTYO14607 1347 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 EXOC1LA0A1B0GW35 172 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 CHEK2O96017 543 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 MARK3P27448 753 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 SLC27A3Q5K4L6 730 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 MIGA2Q7L4E1 593 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 PRPF38AQ8NAV1 312 aaKnown RBP6.96□□□□□ -1.29
LSAMP-207ENST00000539563 CFAP36Q96G28 342 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 NARFQ9UHQ1 456 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 MADDQ8WXG6 1647 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 PMLP29590 882 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 INPP1P49441 399 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 DYNLT1P63172 113 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 GPC5P78333 572 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 IFT88Q13099 833 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 KRT31Q15323 416 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 KCTD16Q68DU8 428 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 RCSD1Q6JBY9 416 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 CYP4F22Q6NT55 531 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 TRIM72Q6ZMU5 477 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 MTRQ99707 1265 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 PIM2Q9P1W9 311 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 CPDO75976 1380 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 GSTA4O15217 222 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 PLS3P13797 630 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 PHKA2P46019 1235 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 ZNF667Q5HYK9 610 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 ENOSF1Q7L5Y1 443 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 FBXO41Q8TF61 875 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 HSPH1Q92598 858 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 ATP6V0A4Q9HBG4 840 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 ASNSD1Q9NWL6 643 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 KIAA1210Q9ULL0 1709 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 PRAMEF22A3QJZ6 481 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 LRRD1A4D1F6 860 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 MIF4GDA9UHW6 222 aaKnown RBP6.96□□□□□ -1.3
LSAMP-207ENST00000539563 PLEKHA8P1O95397 391 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 FTCDO95954 541 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 CALB1P05937 261 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 CACNB1Q02641 598 aaPredicted RBP6.96□□□□□ -1.3
LSAMP-207ENST00000539563 GOLGA8FQ08AF8 430 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 GOLGA8DPQ0D2H9 430 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 RCN2Q14257 317 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 EP400NLQ6ZTU2 488 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 BEST2Q8NFU1 509 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 PSPC1Q8WXF1 523 aaKnown RBP6.96□□□□□ -1.3
LSAMP-207ENST00000539563 GH2P01242 217 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 TAC1P20366 129 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 EPHB1P54762 984 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 ESRRGP62508 458 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 KRT76Q01546 638 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 CRLF3Q8IUI8 442 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 PDIK1LQ8N165 341 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 URGCPQ8TCY9 931 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 MORC4Q8TE76 937 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 TOPORSQ9NS56 1045 aaPredicted RBP6.96□□□□□ -1.3
LSAMP-207ENST00000539563 LMCD1Q9NZU5 365 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L5A8MUK1 530 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 SLC26A4O43511 780 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 SOX5P35711 763 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 IFNAR2P48551 515 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 EMBQ6PCB8 327 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 SPDL1Q96EA4 605 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 ANGPTL2Q9UKU9 493 aa6.96□□□□□ -1.3
LSAMP-207ENST00000539563 MFAP3LO75121 409 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 LMNAP02545 664 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 CYP2E1P05181 493 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 EIF2AK2P19525 551 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 HOXA13P31271 388 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TAP1Q03518 808 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 PDE1CQ14123 709 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 CTTNQ14247 550 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TBC1D10BQ4KMP7 808 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 PODNQ7Z5L7 613 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 SCYL3Q8IZE3 742 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 NRBF2Q96F24 287 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 RMDN3Q96TC7 470 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TRIM62Q9BVG3 475 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 MROH7-TTC4A0A0A0MT08 1334 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 NVLO15381 856 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ZNF18P17022 549 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 CD58P19256 250 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 CASP2P42575 452 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 PAPOLAP51003 745 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TAF1BQ53T94 588 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ALKBH5Q6P6C2 394 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 RSBN1LQ6PCB5 846 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 SIRT2Q8IXJ6 389 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 CNPY4Q8N129 248 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ACRBPQ8NEB7 543 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 FAF2Q96CS3 445 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 HPCAL4Q9UM19 191 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 COL15A1P39059 1388 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ZC3H13Q5T200 1668 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 CTNND1O60716 968 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TOM1L1O75674 476 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms