RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 BROXQ5VW32 411 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 CWF19L1Q69YN2 538 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 MTHFD1LQ6UB35 978 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 BMP8AQ7Z5Y6 402 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 CELF5Q8N6W0 485 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 NEDD1Q8NHV4 660 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 USP33Q8TEY7 942 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 RAB24Q969Q5 203 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 UTP4Q969X6 686 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ELF4Q99607 663 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 C19orf44Q9H6X5 657 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SLC6A20Q9NP91 592 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TMLHEQ9NVH6 421 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 AURKAIP1Q9NWT8 199 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TCEAL9Q9UHQ7 104 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SYNPO2Q9UMS6 1093 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 JAG2Q9Y219 1238 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SETD1BQ9UPS6 1966 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 CCDC66A2RUB6 948 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 H3BS24 57 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ZBED1O96006 694 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TGFB1P01137 390 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 XRCC6P12956 609 aaKnown RBP eCLIP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 FSTP19883 344 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 FUT4P22083 530 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 BCL6P41182 706 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 KCNJ6P48051 423 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 MAPKAPK2P49137 400 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 USP14P54578 494 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 VAMP2P63027 116 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 GUCY1A3Q02108 690 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 NFIAQ12857 509 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PIN1Q13526 163 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ZRSR2Q15696 482 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PTPN21Q16825 1174 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SLC23A3Q6PIS1 610 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 B3GNT9Q6UX72 402 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 CBLL1Q75N03 491 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SIAH1Q8IUQ4 282 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 FAM126BQ8IXS8 530 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 CHST14Q8NCH0 376 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SVIPQ8NHG7 77 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PI4K2BQ8TCG2 481 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PARD3BQ8TEW8 1205 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 FNIP1Q8TF40 1166 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SYTL4Q96C24 671 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 MAGEB10Q96LZ2 347 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 LRGUKQ96M69 825 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TMEM209Q96SK2 561 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SENP7Q9BQF6 1050 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 APOL5Q9BWW9 433 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ZDHHC5Q9C0B5 715 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PTPRHQ9HD43 1115 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PRDM5Q9NQX1 630 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 IP6K2Q9UHH9 426 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TPX2Q9ULW0 747 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 NFU1Q9UMS0 254 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TMEM98Q9Y2Y6 226 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 RWDD3Q9Y3V2 267 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 BACE2Q9Y5Z0 518 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ZNF644Q9H582 1327 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 A0A0A6YYJ9 748 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 CCDC196A0A1B0GTZ2 297 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PTPDC1A2A3K4 754 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 FAM90A27PA6NNH2 459 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ELL2O00472 640 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 HNRNPDLO14979 420 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PJA2O43164 708 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PLIN1O60240 522 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 USP2O75604 605 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TMEM63AO94886 807 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 FKBP9O95302 570 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TYRP14679 529 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ITGB5P18084 799 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SCAND1P57086 179 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PAK1Q13153 545 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TUSC3Q13454 348 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TRIM25Q14258 630 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ZNF827Q17R98 1081 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 CFAP100Q494V2 611 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 MINDY4Q4G0A6 757 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 NKAPLQ5M9Q1 402 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 NOL9Q5SY16 702 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 C10orf62Q5T681 223 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 FKBP9P1Q75LS8 142 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 OTOP3Q7RTS5 596 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 C11orf74Q86VG3 221 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 PTRH1Q86Y79 214 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TMEM151BQ8IW70 566 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 OR2I1PQ8NGU4 316 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 NETO1Q8TDF5 533 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 WIPF2Q8TF74 440 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 DIO2Q92813 273 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 C16orf92Q96LL3 132 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TBC1D32Q96NH3 1257 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 POFUT1Q9H488 388 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 WDR26Q9H7D7 661 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ZMAT4Q9H898 229 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SEC61A2Q9H9S3 476 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 OXSMQ9NWU1 459 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms