RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CROCCP2Q86T23 111 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 DAAM2Q86T65 1068 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 LIN7AO14910 233 aaPredicted RBP20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 SMNDC1O75940 238 aaKnown RBP eCLIP20.2■□□□□ 0.821e-14■■■■□ 22.7
SFSWAP-207ENST00000538548 RARAP10276 462 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 NPEPPSP55786 919 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 PTENP60484 403 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 SARNPP82979 210 aaKnown RBP20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 PDIA5Q14554 519 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 TMEM119Q4V9L6 283 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 KRT79Q5XKE5 535 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 DUPD1Q68J44 220 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 SNX29Q8TEQ0 813 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 DNAJC19Q96DA6 116 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 SLC5A4Q9NY91 659 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 NENFQ9UMX5 172 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 DIAPH2O60879 1101 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 UBOX5O94941 541 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 FGGP02679 453 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 PDE6CP51160 858 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 ALDH5A1P51649 535 aaPredicted RBP20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 MECOMQ03112 1051 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 UBE4AQ14139 1066 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 GBP7Q8N8V2 638 aaPredicted RBP20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 CNKSR1Q969H4 720 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 SAAL1Q96ER3 474 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 ERP44Q9BS26 406 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 SPZ1Q9BXG8 430 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 MOV10L1Q9BXT6 1211 aaKnown RBP20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 HOMER3Q9NSC5 361 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 COL14A1Q05707 1796 aaKnown RBP20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 SNX3O60493 162 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 H2AFZP0C0S5 128 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 PRKCIP41743 596 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 SF3A3Q12874 501 aaKnown RBP eCLIP20.19■□□□□ 0.825e-7■■■■■ 31.3
SFSWAP-207ENST00000538548 C6orf118Q5T5N4 469 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 H2AFVQ71UI9 128 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 KCNK18Q7Z418 384 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 AZI2Q9H6S1 392 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 GOPCQ9HD26 462 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 INTUQ9ULD6 942 aa20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 CORO1CQ9ULV4 474 aaPredicted RBP20.19■□□□□ 0.82
SFSWAP-207ENST00000538548 TLDC2A0PJX2 215 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 DR1Q01658 176 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 ADCY2Q08462 1091 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 KCNH2Q12809 1159 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 MIS18BP1Q6P0N0 1132 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 MTFR1LQ9H019 292 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 MCM9Q9NXL9 1143 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 KIF13BQ9NQT8 1826 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 POTEMA6NI47 508 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 SPDYE3A6NKU9 549 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 KLRF2D3W0D1 207 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 UCHL3P15374 230 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 KLRC3Q07444 240 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 GALNTL6Q49A17 601 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 SOGA3Q5TF21 947 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 VPS36Q86VN1 386 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 DNAAF5Q86Y56 855 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 EGFL6Q8IUX8 553 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 REXO1Q8N1G1 1221 aaKnown RBP20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 RNF25Q96BH1 459 aaPredicted RBP20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 ECT2Q9H8V3 914 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 KIF9Q9HAQ2 790 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 CNOT7Q9UIV1 285 aaKnown RBP20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 DAAM1Q9Y4D1 1078 aa20.18■□□□□ 0.82
SFSWAP-207ENST00000538548 OAS1P00973 400 aaKnown RBP20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 IFI35P80217 286 aaPredicted RBP20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 DPY19L2P1Q6NXN4 242 aa20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 ZC3H3Q8IXZ2 948 aaKnown RBP20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 NUDT12Q9BQG2 462 aa20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 STMN4Q9H169 189 aaPredicted RBP20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 AMFRQ9UKV5 643 aa20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 MTMR7Q9Y216 660 aa20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 DIS3Q9Y2L1 958 aaKnown RBP20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 FAM187AA6NFU0 413 aa20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 IGF2BP3O00425 579 aaKnown RBP eCLIP20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 ACTN1P12814 892 aa20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 SH3GL3Q99963 347 aa20.17■□□□□ 0.82
SFSWAP-207ENST00000538548 SCN7AQ01118 1682 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 USP17L3A6NCW0 530 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 USP17L4A6NCW7 530 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 USP17L1Q7RTZ2 530 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 MICAL1Q8TDZ2 1067 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 NAP1L3Q99457 506 aaPredicted RBP20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 TMEM109Q9BVC6 243 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 NR2E1Q9Y466 385 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 USP15Q9Y4E8 981 aaPredicted RBP20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 USP17L8P0C7I0 530 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 GOLGA8HP0CJ92 632 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 DRG2P55039 364 aaKnown RBP20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 ADAM9Q13443 819 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 SLC29A2Q14542 456 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 NELFCDQ8IXH7 590 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 KLHL29Q96CT2 875 aa20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 FAM84BQ96KN1 310 aaPredicted RBP20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 BMP2KQ9NSY1 1161 aaPredicted RBP20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 BIN2Q9UBW5 565 aaPredicted RBP20.16■□□□□ 0.82
SFSWAP-207ENST00000538548 LUC7L3O95232 432 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms