RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 USP15Q9Y4E8 981 aaPredicted RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 PARP3Q9Y6F1 533 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 ARHGEF5Q12774 1597 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 ZBBXA8MT70 800 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 TLR3O15455 904 aaKnown RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 TMED10P49755 219 aaKnown RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 PAPOLAP51003 745 aaKnown RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 NLRP11P59045 1033 aaKnown RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 PSMC1P62191 440 aaKnown RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 MRPS25P82663 173 aaKnown RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 ITIH4Q14624 930 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 USH1GQ495M9 461 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 TRIM67Q6ZTA4 783 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 ATP6V1E2Q96A05 226 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 EAF2Q96CJ1 260 aaPredicted RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 EMILIN3Q9NT22 766 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 ZNF711Q9Y462 761 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 YEATS2Q9ULM3 1422 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 PRPSAP2O60256 369 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 PRDM1O75626 825 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 ACSL3O95573 720 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 CA8P35219 290 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 GYS2P54840 703 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 ITKQ08881 620 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 C16orf89Q6UX73 402 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 THAP11Q96EK4 314 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 FAM89AQ96GI7 184 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 FAM167BQ9BTA0 163 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 GID8Q9NWU2 228 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 H3BRJ5 948 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 LPXNO60711 386 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 MYCNP04198 464 aaPredicted RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 KCNA3P22001 575 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 SMARCA1P28370 1054 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 MRPS15P82914 257 aaKnown RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 KIF19Q2TAC6 998 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 ADCK5Q3MIX3 580 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 ARHGEF16Q5VV41 709 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 TMEM154Q6P9G4 183 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 HORMAD1Q86X24 394 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 TRIM59Q8IWR1 403 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 SGSM3Q96HU1 749 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 VPS39Q96JC1 886 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 EML4Q9HC35 981 aaKnown RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 UBE2TQ9NPD8 197 aaPredicted RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 SMYD2Q9NRG4 433 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 GINM1Q9NU53 330 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 CHCHD3Q9NX63 227 aaKnown RBP7.4□□□□□ -1.22
SORT1-209ENST00000538502 ZNF212Q9UDV6 495 aa7.4□□□□□ -1.22
SORT1-209ENST00000538502 ATP7BP35670 1465 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 PVALEFA0A1B0GWK0 134 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 ARHGEF37A1IGU5 675 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 ERVV-2B6SEH9 535 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 H0Y3Z8 333 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 BRAFP15056 766 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 SAT1P21673 171 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 OCRLQ01968 901 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 TAP1Q03518 808 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 MORF4L2Q15014 288 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 ATP11CQ8NB49 1132 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 DNAJC9Q8WXX5 260 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 EFCAB14O75071 495 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 ZBED1O96006 694 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 TCIRG1Q13488 830 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 TFDP2Q14188 446 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 FAM47AQ5JRC9 791 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 TBC1D9BQ66K14 1250 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 KCNV2Q8TDN2 545 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 TTC17Q96AE7 1141 aa7.4□□□□□ -1.23
SORT1-209ENST00000538502 ZNF594Q96JF6 807 aaPredicted RBP7.4□□□□□ -1.23
SORT1-209ENST00000538502 LAMC1P11047 1609 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 TMEM247A6NEH6 219 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 GOLGA8TH3BQL2 631 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 AP3B1O00203 1094 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 CD2BP2O95400 341 aaKnown RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 GOLGA8HP0CJ92 632 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 DDX5P17844 614 aaKnown RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 FBLN1P23142 703 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 PGM1P36871 562 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 FMR1NBQ8N0W7 255 aaPredicted RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 TGFBRAP1Q8WUH2 860 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 PLEKHF1Q96S99 279 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 CCT8L2Q96SF2 557 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 ZNF229Q9UJW7 825 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 MLH3Q9UHC1 1453 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 WDR17Q8IZU2 1322 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 SMAPO00193 183 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 PCCAP05165 728 aaPredicted RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 CALB1P05937 261 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 SRGAP2CP0DJJ0 459 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 DLATP10515 647 aaKnown RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 NECTIN1Q15223 517 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 CNGA3Q16281 694 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 DNAAF3Q8N9W5 541 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 ZBTB38Q8NAP3 1195 aaPredicted RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 FAF2Q96CS3 445 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 NAF1Q96HR8 494 aaKnown RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 CCDC17Q96LX7 622 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 KCNK16Q96T55 309 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 BRIP1Q9BX63 1249 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms