RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 DTNBP1Q96EV8 351 aa19.35■□□□□ 0.69
TRA2A-211ENST00000538367 EPB41L4BQ9H329 900 aa19.35■□□□□ 0.69
TRA2A-211ENST00000538367 STK17AQ9UEE5 414 aa19.35■□□□□ 0.69
TRA2A-211ENST00000538367 RPL26L1Q9UNX3 145 aaKnown RBP19.35■□□□□ 0.69
TRA2A-211ENST00000538367 A0A087X0T9 212 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 PP2D1A8MPX8 630 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 ZPR1O75312 459 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 ATP5HO75947 161 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 FAM228BP0C875 321 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 ATP6V1C1P21283 382 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 PMS2P54278 862 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 MARSP56192 900 aaKnown RBP19.34■□□□□ 0.69
TRA2A-211ENST00000538367 KLHL30Q0D2K2 578 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 MFSD5Q6N075 450 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 BICD1Q96G01 975 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 NAP1L3Q99457 506 aaPredicted RBP19.34■□□□□ 0.69
TRA2A-211ENST00000538367 STXBP5LQ9Y2K9 1186 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 NKRFO15226 690 aaKnown RBP eCLIP19.34■□□□□ 0.691e-12■■□□□ 11.7
TRA2A-211ENST00000538367 ACADSP16219 412 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 CTSWP56202 376 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 RNASE9P60153 205 aaKnown RBP19.34■□□□□ 0.69
TRA2A-211ENST00000538367 SDCCAG8Q86SQ7 713 aaPredicted RBP19.34■□□□□ 0.69
TRA2A-211ENST00000538367 EEF2KMTQ96G04 330 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 CEP63Q96MT8 703 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 PRMT1Q99873 361 aaKnown RBP19.34■□□□□ 0.69
TRA2A-211ENST00000538367 LRRC27Q9C0I9 530 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 ZDHHC18Q9NUE0 388 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.34■□□□□ 0.69
TRA2A-211ENST00000538367 RGL1Q9NZL6 768 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 AMACRQ9UHK6 382 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 ATP8A1Q9Y2Q0 1164 aa19.34■□□□□ 0.69
TRA2A-211ENST00000538367 TTI1O43156 1089 aa19.33■□□□□ 0.69
TRA2A-211ENST00000538367 ALDH3A1P30838 453 aa19.33■□□□□ 0.69
TRA2A-211ENST00000538367 PTENP60484 403 aa19.33■□□□□ 0.69
TRA2A-211ENST00000538367 RASGRF1Q13972 1273 aa19.33■□□□□ 0.69
TRA2A-211ENST00000538367 DHX34Q14147 1143 aaKnown RBP19.33■□□□□ 0.69
TRA2A-211ENST00000538367 PLS1Q14651 629 aa19.33■□□□□ 0.69
TRA2A-211ENST00000538367 CNGA2Q16280 664 aa19.33■□□□□ 0.69
TRA2A-211ENST00000538367 DUPD1Q68J44 220 aa19.33■□□□□ 0.69
TRA2A-211ENST00000538367 TMEM60Q9H2L4 133 aa19.33■□□□□ 0.69
TRA2A-211ENST00000538367 COL4A3BPQ9Y5P4 624 aa19.33■□□□□ 0.69
TRA2A-211ENST00000538367 FAM205AQ6ZU69 1335 aa19.33■□□□□ 0.68
TRA2A-211ENST00000538367 SMIM24O75264 130 aa19.33■□□□□ 0.68
TRA2A-211ENST00000538367 GNAT1P11488 350 aa19.33■□□□□ 0.68
TRA2A-211ENST00000538367 SPICE1Q8N0Z3 855 aa19.33■□□□□ 0.68
TRA2A-211ENST00000538367 TPCN2Q8NHX9 752 aa19.33■□□□□ 0.68
TRA2A-211ENST00000538367 BRIP1Q9BX63 1249 aa19.33■□□□□ 0.68
TRA2A-211ENST00000538367 AP1M1Q9BXS5 423 aa19.33■□□□□ 0.68
TRA2A-211ENST00000538367 RNPEPL1Q9HAU8 725 aa19.33■□□□□ 0.68
TRA2A-211ENST00000538367 PARP2Q9UGN5 583 aa19.33■□□□□ 0.68
TRA2A-211ENST00000538367 OR52Z1P0C646 297 aa19.32■□□□□ 0.68
TRA2A-211ENST00000538367 MXRA7P84157 204 aa19.32■□□□□ 0.68
TRA2A-211ENST00000538367 ACVR2BQ13705 512 aa19.32■□□□□ 0.68
TRA2A-211ENST00000538367 RNF43Q68DV7 783 aa19.32■□□□□ 0.68
TRA2A-211ENST00000538367 TRAPPC9Q96Q05 1148 aa19.32■□□□□ 0.68
TRA2A-211ENST00000538367 LSM14BQ9BX40 385 aaKnown RBP19.32■□□□□ 0.68
TRA2A-211ENST00000538367 ROPN1BQ9BZX4 212 aaPredicted RBP19.32■□□□□ 0.68
TRA2A-211ENST00000538367 ROPN1Q9HAT0 212 aaPredicted RBP19.32■□□□□ 0.68
TRA2A-211ENST00000538367 TXLNGQ9NUQ3 528 aa19.32■□□□□ 0.68
TRA2A-211ENST00000538367 NHSQ6T4R5 1651 aa19.32■□□□□ 0.68
TRA2A-211ENST00000538367 CALB2P22676 271 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 PDE6BP35913 854 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 ANO7Q6IWH7 933 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 SV2BQ7L1I2 683 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 DNAJC10Q8IXB1 793 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 ENDOVQ8N8Q3 282 aaKnown RBP19.31■□□□□ 0.68
TRA2A-211ENST00000538367 PRCCQ92733 491 aaPredicted RBP19.31■□□□□ 0.68
TRA2A-211ENST00000538367 CALML4Q96GE6 196 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 ERP44Q9BS26 406 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRA2A-211ENST00000538367 NLRC4Q9NPP4 1024 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 RASAL2Q9UJF2 1139 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRA2A-211ENST00000538367 LAMB1P07942 1786 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 DPPA5A6NC42 116 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 STARD3NLO95772 234 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 RXRBP28702 533 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 FKBP3Q00688 224 aaKnown RBP19.31■□□□□ 0.68
TRA2A-211ENST00000538367 DYNC1I2Q13409 638 aaKnown RBP19.31■□□□□ 0.68
TRA2A-211ENST00000538367 TSNAXIP1Q2TAA8 658 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 PEX26Q7Z412 305 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 SEPT12Q8IYM1 358 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 TEKT4Q8WW24 435 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 GRAMD1AQ96CP6 724 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 HES6Q96HZ4 224 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 PACSIN1Q9BY11 444 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 TANGO6Q9C0B7 1094 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 AZI2Q9H6S1 392 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 GREM2Q9H772 168 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 PRKAG3Q9UGI9 489 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 NENFQ9UMX5 172 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 SBF2Q86WG5 1849 aa19.31■□□□□ 0.68
TRA2A-211ENST00000538367 KCNQ2O43526 872 aa19.3■□□□□ 0.68
TRA2A-211ENST00000538367 POLR2FP61218 127 aaKnown RBP19.3■□□□□ 0.68
TRA2A-211ENST00000538367 KLRC3Q07444 240 aa19.3■□□□□ 0.68
TRA2A-211ENST00000538367 AGGF1Q8N302 714 aaeCLIP19.3■□□□□ 0.682e-25■■■□□ 18.3
TRA2A-211ENST00000538367 FAM89AQ96GI7 184 aa19.3■□□□□ 0.68
TRA2A-211ENST00000538367 TMEM237Q96Q45 408 aa19.3■□□□□ 0.68
TRA2A-211ENST00000538367 VCXQ9H320 206 aa19.3■□□□□ 0.68
TRA2A-211ENST00000538367 ADAMTS1Q9UHI8 967 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms