RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 FLT3LGP49771 235 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 GNAQP50148 359 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 RCAN1P53805 252 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 EVCP57679 992 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 FGD1P98174 961 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 COL9A3Q14050 684 aaPredicted RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 SNRNP48Q6IEG0 339 aaKnown RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 Q6ZUG5 572 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 GPR142Q7Z601 462 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 NBPF11Q86T75 865 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 ADGRF4Q8IZF3 695 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 ZNF654Q8IZM8 581 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 CPXCR1Q8N123 301 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 CEP120Q8N960 986 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 FANCBQ8NB91 859 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 CHST13Q8NET6 341 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 CTCFLQ8NI51 663 aaPredicted RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 RAET1EQ8TD07 263 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 SOCS4Q8WXH5 440 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 USP6NLQ92738 828 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 FAM129BQ96TA1 746 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 AGXT2Q9BYV1 514 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 MCOLN1Q9GZU1 580 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 UBA5Q9GZZ9 404 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 MAF1Q9H063 256 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 ALDH8A1Q9H2A2 487 aaPredicted RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 SUV39H2Q9H5I1 410 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 CWC22Q9HCG8 908 aaKnown RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 RAVER2Q9HCJ3 691 aaKnown RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 FBXO40Q9UH90 709 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 MAD2L2Q9UI95 211 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 KIAA0100Q14667 2235 aaKnown RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 MYH6P13533 1939 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 A0A0G2JMZ2 1700 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 A0A0A0MRY4 1105 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 CCDC196A0A1B0GTZ2 297 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 ZBTB43O43298 467 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 HOXC6P09630 235 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 TCF3P15923 654 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 RGS2P41220 211 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 ARL4DP49703 201 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 PLCB3Q01970 1234 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 PRKCZQ05513 592 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 TRAF1Q13077 416 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 GRB14Q14449 540 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 KCTD2Q14681 263 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 ECM1Q16610 540 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 WDR78Q5VTH9 848 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 RASGRP2Q7LDG7 609 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 NUP133Q8WUM0 1156 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 ALKBH8Q96BT7 664 aaKnown RBP6.87□□□□□ -1.31
DDB1-210ENST00000538129 LRRC2Q9BYS8 371 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 RIOX1Q9H6W3 641 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 JMJD4Q9H9V9 463 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 VAT1LQ9HCJ6 419 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 PDRG1Q9NUG6 133 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 SLC5A4Q9NY91 659 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 GABRQQ9UN88 632 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 RIPK3Q9Y572 518 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 PTCH2Q9Y6C5 1203 aa6.87□□□□□ -1.31
DDB1-210ENST00000538129 ZSWIM8A7E2V4 1837 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 PLXNB2O15031 1838 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 PNMA6FA0A0J9YX94 578 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 PDE2AO00408 941 aaPredicted RBP6.86□□□□□ -1.31
DDB1-210ENST00000538129 EREGO14944 169 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 ZBTB5O15062 677 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 DHX16O60231 1041 aaKnown RBP6.86□□□□□ -1.31
DDB1-210ENST00000538129 ADCY3O60266 1144 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 CPA1P15085 419 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 CYP2B6P20813 491 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 GRK4P32298 578 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 SNAP25P60880 206 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 ANKRD1Q15327 319 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 CCDC174Q6PII3 467 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 APOA5Q6Q788 366 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 DPP9Q86TI2 863 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 ANKRD35Q8N283 1001 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 BRF1Q92994 677 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 ARMC5Q96C12 935 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 MTMR8Q96EF0 704 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 ZNF274Q96GC6 653 aaPredicted RBP6.86□□□□□ -1.31
DDB1-210ENST00000538129 TCEANC2Q96MN5 208 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 MMP19Q99542 508 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 OSMRQ99650 979 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 SPZ1Q9BXG8 430 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 AMNQ9BXJ7 453 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 C22orf23Q9BZE7 217 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 NIF3L1Q9GZT8 377 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 RASSF4Q9H2L5 321 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 CPVLQ9H3G5 476 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 ACAD9Q9H845 621 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 UPF2Q9HAU5 1272 aaKnown RBP6.86□□□□□ -1.31
DDB1-210ENST00000538129 RBM28Q9NW13 759 aaKnown RBP6.86□□□□□ -1.31
DDB1-210ENST00000538129 FOXD3Q9UJU5 478 aaPredicted RBP6.86□□□□□ -1.31
DDB1-210ENST00000538129 CCPG1Q9ULG6 757 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 DIS3Q9Y2L1 958 aaKnown RBP6.86□□□□□ -1.31
DDB1-210ENST00000538129 CENPFP49454 3210 aa6.86□□□□□ -1.31
DDB1-210ENST00000538129 DNAJC25-GNG10A0A024R161 153 aa6.85□□□□□ -1.31
DDB1-210ENST00000538129 KLF18A0A0U1RQI7 1052 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms