RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ADGRE1Q14246 886 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 NBR1Q14596 966 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 ZNF484Q5JVG2 852 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 FAM160B1Q5W0V3 765 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 TAF2Q6P1X5 1199 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 ANO5Q75V66 913 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 HERC6Q8IVU3 1022 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 CRIPAKQ8N1N5 446 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 TMEM40Q8WWA1 233 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 TIFAQ96CG3 184 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 C8orf76Q96K31 380 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 FAM20AQ96MK3 541 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 NKX2-4Q9H2Z4 354 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 TMX1Q9H3N1 280 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 RGL1Q9NZL6 768 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 ABHD14A-ACY1A0A1B0GW23 586 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 TBX3O15119 743 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 GPR32O75388 356 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 BAIAP3O94812 1187 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 SLITRK3O94933 977 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 PARNO95453 639 aaKnown RBP9.47□□□□□ -0.89
SPARC-208ENST00000538026 OATP04181 439 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 GCFC2P16383 781 aaKnown RBP9.47□□□□□ -0.89
SPARC-208ENST00000538026 U2AF2P26368 475 aaKnown RBP eCLIP9.47□□□□□ -0.89
SPARC-208ENST00000538026 MRPS6P82932 125 aaKnown RBP9.47□□□□□ -0.89
SPARC-208ENST00000538026 HMGN5P82970 282 aaKnown RBP9.47□□□□□ -0.89
SPARC-208ENST00000538026 CUL4AQ13619 759 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 MIER3Q7Z3K6 550 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 BANK1Q8NDB2 785 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 RDM1Q8NG50 284 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 PHOSPHO2Q8TCD6 241 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 BBXQ8WY36 941 aaPredicted RBP9.47□□□□□ -0.89
SPARC-208ENST00000538026 HSD17B14Q9BPX1 270 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 NIFKQ9BYG3 293 aaKnown RBP9.47□□□□□ -0.89
SPARC-208ENST00000538026 FOXP1Q9H334 677 aaPredicted RBP9.47□□□□□ -0.89
SPARC-208ENST00000538026 ZNF576Q9H609 170 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 PCDHA11Q9Y5I1 949 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 COL1A2P08123 1366 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 BDP1A6H8Y1 2624 aa9.47□□□□□ -0.89
SPARC-208ENST00000538026 A0A087WWV3 80 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 IGKV6-21A0A0C4DH24 114 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 RFXAPO00287 272 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 ENPP3O14638 875 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 ST18O60284 1047 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 MGEA5O60502 916 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 GJB5O95377 273 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 VTNP04004 478 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 ACTN1P12814 892 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 ATP2B1P20020 1258 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 CD52P31358 61 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 SFNP31947 248 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 CLCN3P51790 818 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 JAK3P52333 1124 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 NPEPPSP55786 919 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 TAP1Q03518 808 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 EPHA7Q15375 998 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 ZNF174Q15697 407 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 IL17AQ16552 155 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 TMEM266Q2M3C6 531 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 PLA2G4FQ68DD2 849 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 CKAP2LQ8IYA6 745 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 LRRC71Q8N4P6 559 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 MYLIPQ8WY64 445 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 ZNF668Q96K58 619 aaPredicted RBP9.46□□□□□ -0.9
SPARC-208ENST00000538026 CELF4Q9BZC1 486 aaKnown RBP9.46□□□□□ -0.9
SPARC-208ENST00000538026 ADAMTS10Q9H324 1103 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 STXBP5LQ9Y2K9 1186 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 NOC2LQ9Y3T9 749 aaKnown RBP9.46□□□□□ -0.9
SPARC-208ENST00000538026 SAMM50Q9Y512 469 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 ARID2Q68CP9 1835 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 KDM3AQ9Y4C1 1321 aa9.46□□□□□ -0.9
SPARC-208ENST00000538026 TMEM265A0A087WTH1 108 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 CA3P07451 260 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 LINC00271P0C7V0 271 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 SPATA31C1P0DKV0 1188 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 GJB2P29033 226 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 MCM7P33993 719 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 HTRA4P83105 476 aaPredicted RBP9.45□□□□□ -0.9
SPARC-208ENST00000538026 TRIM29Q14134 588 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 IKBKEQ14164 716 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 CTTNQ14247 550 aaKnown RBP9.45□□□□□ -0.9
SPARC-208ENST00000538026 CALCRLQ16602 461 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 ECM1Q16610 540 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 KIZQ2M2Z5 673 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 XKR3Q5GH77 459 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 ZNF697Q5TEC3 545 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 EFCAB12Q6NXP0 572 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 FAM117BQ6P1L5 589 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 NOSTRINQ8IVI9 506 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 NME8Q8N427 588 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 SEPT8Q92599 483 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 TOP1MTQ969P6 601 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 DYDC2Q96IM9 177 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 PPP1R16BQ96T49 567 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 SLC9A7Q96T83 725 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 IFIH1Q9BYX4 1025 aaKnown RBP9.45□□□□□ -0.9
SPARC-208ENST00000538026 RC3H2Q9HBD1 1191 aaKnown RBP9.45□□□□□ -0.9
SPARC-208ENST00000538026 ERVK-5Q9HDB9 667 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 PADI3Q9ULW8 664 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 PCDHB6Q9Y5E3 794 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms