RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 FLT1P17948 1338 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 KCNH2Q12809 1159 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 NEDD9Q14511 834 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 STXBP2Q15833 593 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 SGO2Q562F6 1265 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 USP49Q70CQ1 688 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 RSPH3Q86UC2 560 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 RAD54LQ92698 747 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 CALN1Q9BXU9 219 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 FBXO40Q9UH90 709 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
GGA3-201ENST00000537686 CD2APQ9Y5K6 639 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 PHLPP1O60346 1717 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 A6NJR5 290 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 PHBP35232 272 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 ZNF394Q53GI3 561 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 CYP4F22Q6NT55 531 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 PDZD4Q76G19 769 aaPredicted RBP10.89□□□□□ -0.67
GGA3-201ENST00000537686 ABI1Q8IZP0 508 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 PROM2Q8N271 834 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 GUF1Q8N442 669 aaKnown RBP10.89□□□□□ -0.67
GGA3-201ENST00000537686 ARHGEF2Q92974 986 aaKnown RBP10.89□□□□□ -0.67
GGA3-201ENST00000537686 ZNF512BQ96KM6 892 aaPredicted RBP10.89□□□□□ -0.67
GGA3-201ENST00000537686 FAM81BQ96LP2 452 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 MRPL47Q9HD33 250 aaKnown RBP10.89□□□□□ -0.67
GGA3-201ENST00000537686 SEPT10Q9P0V9 454 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 DNAJC12Q9UKB3 198 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 ATP8A1Q9Y2Q0 1164 aa10.89□□□□□ -0.67
GGA3-201ENST00000537686 KLRK1P26718 216 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 QARSP47897 775 aaKnown RBP10.88□□□□□ -0.67
GGA3-201ENST00000537686 IFNAR2P48551 515 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 JAK3P52333 1124 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 KRT76Q01546 638 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 C2orf54Q08AI8 447 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 ZNF543Q08ER8 600 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 SBK1Q52WX2 424 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 SLC10A5Q5PT55 438 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 CCDC62Q6P9F0 684 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 CCDC13Q8IYE1 715 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 ANAPC4Q9UJX5 808 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 LRRD1A4D1F6 860 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 POC1B-GALNT4F8VUJ3 575 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 SLC16A4O15374 487 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 NDUFB10O96000 172 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 ARHGAP25P42331 645 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 YWHAGP61981 247 aaKnown RBP eCLIP10.88□□□□□ -0.67
GGA3-201ENST00000537686 FBXO33Q7Z6M2 555 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 METTL16Q86W50 562 aaKnown RBP10.88□□□□□ -0.67
GGA3-201ENST00000537686 RILPQ96NA2 401 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 RUNDC3BQ96NL0 473 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 PARD6BQ9BYG5 372 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
GGA3-201ENST00000537686 ABHD10Q9NUJ1 306 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 RNF14Q9UBS8 474 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 MKRN1Q9UHC7 482 aaKnown RBP10.88□□□□□ -0.67
GGA3-201ENST00000537686 FBXO2Q9UK22 296 aaPredicted RBP10.88□□□□□ -0.67
GGA3-201ENST00000537686 PNMA3Q9UL41 463 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 TTC26A0AVF1 554 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 SGK1O00141 431 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 ABCD1P33897 745 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 MRPS25P82663 173 aaKnown RBP10.88□□□□□ -0.67
GGA3-201ENST00000537686 STRIP1Q5VSL9 837 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 GKAP1Q5VSY0 366 aaPredicted RBP10.88□□□□□ -0.67
GGA3-201ENST00000537686 LDHDQ86WU2 507 aa10.88□□□□□ -0.67
GGA3-201ENST00000537686 PHRF1Q9P1Y6 1649 aaKnown RBP10.88□□□□□ -0.67
GGA3-201ENST00000537686 CCDC160A6NGH7 325 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 CLDN3O15551 220 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 EPHB4P54760 987 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 DYNLT1P63172 113 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 ORC2Q13416 577 aaPredicted RBP10.87□□□□□ -0.67
GGA3-201ENST00000537686 BBOF1Q8ND07 529 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 FAM71BQ8TC56 605 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 CAPS2Q9BXY5 557 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 SNX25Q9H3E2 840 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 AFG3L2Q9Y4W6 797 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 DISP2A7MBM2 1401 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 GOLGA8KD6RF30 607 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 P4HBP07237 508 aaKnown RBP10.87□□□□□ -0.67
GGA3-201ENST00000537686 FCER1AP12319 257 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 LMNB2Q03252 620 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 MAPK6Q16659 721 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 KNOP1Q1ED39 458 aaKnown RBP10.87□□□□□ -0.67
GGA3-201ENST00000537686 CEP55Q53EZ4 464 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 SLFN12LQ6IEE8 588 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 CATSPER4Q7RTX7 472 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 COL23A1Q86Y22 540 aaPredicted RBP10.87□□□□□ -0.67
GGA3-201ENST00000537686 RFX6Q8HWS3 928 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 CACNA2D3Q8IZS8 1091 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 OTUD5Q96G74 571 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 RPF1Q9H9Y2 349 aaKnown RBP10.87□□□□□ -0.67
GGA3-201ENST00000537686 PFDN4Q9NQP4 134 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.87□□□□□ -0.67
GGA3-201ENST00000537686 STRCP1A6NGW2 1772 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 COL14A1Q05707 1796 aaKnown RBP10.87□□□□□ -0.67
GGA3-201ENST00000537686 DENND3A2RUS2 1198 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 WTIPA6NIX2 430 aaPredicted RBP10.87□□□□□ -0.67
GGA3-201ENST00000537686 LRRC53A6NM62 1247 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 CIB2O75838 187 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 RASA1P20936 1047 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms