RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 LOXHD1Q8IVV2 1947 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 SLFN14P0C7P3 912 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 PLA2G4BP0C869 781 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 PTMSP20962 102 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 SLC12A3P55017 1021 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 NPEPPSP55786 919 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 TARBP2Q15633 366 aaKnown RBP27.04■■□□□ 1.92
HMGA2-208ENST00000537429 GLT1D1Q96MS3 346 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 SH2D3AQ9BRG2 576 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 DACT1Q9NYF0 836 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 DNAH12Q6ZR08 3092 aa27.04■■□□□ 1.92
HMGA2-208ENST00000537429 A0A1W2PQ45 241 aaPredicted RBP27.03■■□□□ 1.92
HMGA2-208ENST00000537429 A0A1W2PQY0 241 aa27.03■■□□□ 1.92
HMGA2-208ENST00000537429 MCM6Q14566 821 aa27.03■■□□□ 1.92
HMGA2-208ENST00000537429 XKR9Q5GH70 373 aa27.03■■□□□ 1.92
HMGA2-208ENST00000537429 ANKLE1Q8NAG6 615 aa27.03■■□□□ 1.92
HMGA2-208ENST00000537429 CEP170P1Q96L14 293 aa27.03■■□□□ 1.92
HMGA2-208ENST00000537429 CEP89Q96ST8 783 aa27.03■■□□□ 1.92
HMGA2-208ENST00000537429 CYP26B1Q9NR63 512 aa27.03■■□□□ 1.92
HMGA2-208ENST00000537429 GRIN2DO15399 1336 aa27.02■■□□□ 1.92
HMGA2-208ENST00000537429 ZBTB42B2RXF5 422 aa27.02■■□□□ 1.92
HMGA2-208ENST00000537429 INSRRP14616 1297 aa27.02■■□□□ 1.92
HMGA2-208ENST00000537429 NBPF20Q3BBV1 942 aa27.02■■□□□ 1.92
HMGA2-208ENST00000537429 KRBA2Q6ZNG9 492 aa27.02■■□□□ 1.92
HMGA2-208ENST00000537429 CEP57L1Q8IYX8 460 aa27.02■■□□□ 1.92
HMGA2-208ENST00000537429 TIGD1Q96MW7 591 aa27.02■■□□□ 1.92
HMGA2-208ENST00000537429 KBTBD4Q9NVX7 518 aa27.02■■□□□ 1.92
HMGA2-208ENST00000537429 KIAA0100Q14667 2235 aaKnown RBP27.02■■□□□ 1.92
HMGA2-208ENST00000537429 MBD3O95983 291 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 SMIM10L2AP0DMW4 78 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 SMIM10L2BP0DMW5 78 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 MTERF2Q49AM1 385 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 ZNF484Q5JVG2 852 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 SV2BQ7L1I2 683 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 CNNM3Q8NE01 707 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 MTRQ99707 1265 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 MAGEF1Q9HAY2 307 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 PPME1Q9Y570 386 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 COL1A2P08123 1366 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 ARID2Q68CP9 1835 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 NRCAMQ92823 1304 aa27.01■■□□□ 1.91
HMGA2-208ENST00000537429 ARHGEF35A5YM69 484 aa27■■□□□ 1.91
HMGA2-208ENST00000537429 PPFIA1Q13136 1202 aa27■■□□□ 1.91
HMGA2-208ENST00000537429 PPP1R13LQ8WUF5 828 aa27■■□□□ 1.91
HMGA2-208ENST00000537429 ABHD8Q96I13 439 aa27■■□□□ 1.91
HMGA2-208ENST00000537429 TNMDQ9H2S6 317 aa27■■□□□ 1.91
HMGA2-208ENST00000537429 KINO60870 393 aaKnown RBP27■■□□□ 1.91
HMGA2-208ENST00000537429 SSBP05455 408 aaKnown RBP eCLIP27■■□□□ 1.91
HMGA2-208ENST00000537429 ITGA7Q13683 1181 aa27■■□□□ 1.91
HMGA2-208ENST00000537429 DHX8Q14562 1220 aaKnown RBP27■■□□□ 1.91
HMGA2-208ENST00000537429 C7orf31Q8N865 590 aa27■■□□□ 1.91
HMGA2-208ENST00000537429 CCDC43Q96MW1 224 aaKnown RBP27■■□□□ 1.91
HMGA2-208ENST00000537429 STARD7Q9NQZ5 370 aa27■■□□□ 1.91
HMGA2-208ENST00000537429 HDAC6Q9UBN7 1215 aa27■■□□□ 1.91
HMGA2-208ENST00000537429 HOXC8P31273 242 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 GRIK4Q16099 956 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 RINT1Q6NUQ1 792 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 NFRKBQ6P4R8 1299 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 PADI6Q6TGC4 694 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 SH3RF1Q7Z6J0 888 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 SESTD1Q86VW0 696 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 TNS4Q8IZW8 715 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 TRAPPC12Q8WVT3 735 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 STAMQ92783 540 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 SETD4Q9NVD3 440 aa26.99■■□□□ 1.91
HMGA2-208ENST00000537429 RRN3P2A6NIE6 340 aa26.98■■□□□ 1.91
HMGA2-208ENST00000537429 CYP11B2P19099 503 aa26.98■■□□□ 1.91
HMGA2-208ENST00000537429 ADAM17P78536 824 aa26.98■■□□□ 1.91
HMGA2-208ENST00000537429 KANK3Q6NY19 840 aa26.98■■□□□ 1.91
HMGA2-208ENST00000537429 C1orf186Q6ZWK4 172 aa26.98■■□□□ 1.91
HMGA2-208ENST00000537429 LMBR1Q8WVP7 490 aa26.98■■□□□ 1.91
HMGA2-208ENST00000537429 PAGE5Q96GU1 130 aa26.98■■□□□ 1.91
HMGA2-208ENST00000537429 SENP6Q9GZR1 1112 aaPredicted RBP26.98■■□□□ 1.91
HMGA2-208ENST00000537429 DHX33Q9H6R0 707 aaKnown RBP26.98■■□□□ 1.91
HMGA2-208ENST00000537429 GTF2IRD1Q9UHL9 959 aa26.98■■□□□ 1.91
HMGA2-208ENST00000537429 COL6A1P12109 1028 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 EN2P19622 333 aaPredicted RBP26.97■■□□□ 1.91
HMGA2-208ENST00000537429 IGBP1P78318 339 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 HIC1Q14526 733 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 ARSHQ5FYA8 562 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 FAM47CQ5HY64 1035 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 MARCH8Q5T0T0 291 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 SLC43A3Q8NBI5 491 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 RUSC1Q9BVN2 902 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 PDLIM7Q9NR12 457 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 KCND2Q9NZV8 630 aa26.97■■□□□ 1.91
HMGA2-208ENST00000537429 DGAT1O75907 488 aa26.96■■□□□ 1.91
HMGA2-208ENST00000537429 AFMP43652 599 aa26.96■■□□□ 1.91
HMGA2-208ENST00000537429 AMPD3Q01432 767 aa26.96■■□□□ 1.91
HMGA2-208ENST00000537429 GPBP1Q86WP2 473 aa26.96■■□□□ 1.91
HMGA2-208ENST00000537429 ELOA2Q8IYF1 753 aaPredicted RBP26.96■■□□□ 1.91
HMGA2-208ENST00000537429 DIS3LQ8TF46 1054 aaKnown RBP26.96■■□□□ 1.91
HMGA2-208ENST00000537429 KAT6AQ92794 2004 aa26.96■■□□□ 1.91
HMGA2-208ENST00000537429 A0A0U1RQG5 324 aaPredicted RBP26.95■■□□□ 1.91
HMGA2-208ENST00000537429 C17orf102A2RUQ5 167 aa26.95■■□□□ 1.91
HMGA2-208ENST00000537429 MYMKA6NI61 221 aa26.95■■□□□ 1.91
HMGA2-208ENST00000537429 USO1O60763 962 aaKnown RBP26.95■■□□□ 1.91
HMGA2-208ENST00000537429 MAFO75444 373 aaPredicted RBP26.95■■□□□ 1.91
HMGA2-208ENST00000537429 KLRC1P26715 233 aa26.95■■□□□ 1.91
HMGA2-208ENST00000537429 RFC5P40937 340 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms