RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ADAM17P78536 824 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 CUL4AQ13619 759 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 GRIK4Q16099 956 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 PDXDC2PQ6P474 469 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 SERINC5Q86VE9 423 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 POTEDQ86YR6 584 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 LMBR1Q8WVP7 490 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 HAS1Q92839 578 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 WNT8BQ93098 351 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 FAM20AQ96MK3 541 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 TGS1Q96RS0 853 aaKnown RBP20.25■□□□□ 0.83
CCDC61-201ENST00000536603 LMCD1Q9NZU5 365 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 GABBR1Q9UBS5 961 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 HCN4Q9Y3Q4 1203 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 XIRP2A4UGR9 3374 aa20.25■□□□□ 0.83
CCDC61-201ENST00000536603 KAT6AQ92794 2004 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 POTEB3A0JP26 581 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 WNT7AO00755 349 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 TBX3O15119 743 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 GJB5O95377 273 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 CXCL10P02778 98 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 SFNP31947 248 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 SLC26A2P50443 739 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 JAK3P52333 1124 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 IGBP1P78318 339 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 RBL2Q08999 1139 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 POTEBQ6S5H4 581 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 MIER3Q7Z3K6 550 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 NOSTRINQ8IVI9 506 aa20.24■□□□□ 0.83
CCDC61-201ENST00000536603 TNPO1Q92973 898 aaKnown RBP20.24■□□□□ 0.83
CCDC61-201ENST00000536603 MAFBQ9Y5Q3 323 aaPredicted RBP20.24■□□□□ 0.83
CCDC61-201ENST00000536603 BDP1A6H8Y1 2624 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 RRN3P2A6NIE6 340 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 ATP4AP20648 1035 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 THPOP40225 353 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 TRIM71Q2Q1W2 868 aaKnown RBP20.23■□□□□ 0.83
CCDC61-201ENST00000536603 TMEM31Q5JXX7 168 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 ZNF618Q5T7W0 954 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 B3GNT9Q6UX72 402 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 TRMT1LQ7Z2T5 733 aaKnown RBP20.23■□□□□ 0.83
CCDC61-201ENST00000536603 CKAP2LQ8IYA6 745 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 LRFN3Q9BTN0 628 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 SUGCTQ9HAC7 445 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 SIP14410 1827 aa20.23■□□□□ 0.83
CCDC61-201ENST00000536603 LINC01553A4QN01 128 aa20.22■□□□□ 0.83
CCDC61-201ENST00000536603 H3BQV1 296 aa20.22■□□□□ 0.83
CCDC61-201ENST00000536603 K7ELQ4 463 aaPredicted RBP20.22■□□□□ 0.83
CCDC61-201ENST00000536603 BAG4O95429 457 aaKnown RBP20.22■□□□□ 0.83
CCDC61-201ENST00000536603 U2AF2P26368 475 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCDC61-201ENST00000536603 ERVK-21P61565 698 aa20.22■□□□□ 0.83
CCDC61-201ENST00000536603 TCTN1Q2MV58 587 aa20.22■□□□□ 0.83
CCDC61-201ENST00000536603 MARCH8Q5T0T0 291 aa20.22■□□□□ 0.83
CCDC61-201ENST00000536603 LARP1BQ659C4 914 aaKnown RBP20.22■□□□□ 0.83
CCDC61-201ENST00000536603 ATP8B4Q8TF62 1192 aa20.22■□□□□ 0.83
CCDC61-201ENST00000536603 TUBE1Q9UJT0 475 aa20.22■□□□□ 0.83
CCDC61-201ENST00000536603 HBP1O60381 514 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 NEMFO60524 1076 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 AMHP03971 560 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 MCM7P33993 719 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 PPP2R5CQ13362 524 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 CALCRLQ16602 461 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 MCTP1Q6DN14 999 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 RUFY4Q6ZNE9 571 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 SLFN12Q8IYM2 578 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 RDM1Q8NG50 284 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 TRAPPC12Q8WVT3 735 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 ZBTB10Q96DT7 871 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 VAV3Q9UKW4 847 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 INSL6Q9Y581 213 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 NCOR1O75376 2440 aa20.21■□□□□ 0.83
CCDC61-201ENST00000536603 MBLAC1A4D2B0 266 aaPredicted RBP20.2■□□□□ 0.82
CCDC61-201ENST00000536603 EML1O00423 815 aa20.2■□□□□ 0.82
CCDC61-201ENST00000536603 ZNF174Q15697 407 aa20.2■□□□□ 0.82
CCDC61-201ENST00000536603 MYOCDQ8IZQ8 938 aa20.2■□□□□ 0.82
CCDC61-201ENST00000536603 FBXO22Q8NEZ5 403 aa20.2■□□□□ 0.82
CCDC61-201ENST00000536603 BBXQ8WY36 941 aaPredicted RBP20.2■□□□□ 0.82
CCDC61-201ENST00000536603 UBE2ZQ9H832 354 aaPredicted RBP20.2■□□□□ 0.82
CCDC61-201ENST00000536603 IGSF9BQ9UPX0 1349 aa20.2■□□□□ 0.82
CCDC61-201ENST00000536603 MYH9P35579 1960 aaKnown RBP20.19■□□□□ 0.82
CCDC61-201ENST00000536603 RSPH10B2B2RC85 870 aa20.19■□□□□ 0.82
CCDC61-201ENST00000536603 ZNF862O60290 1169 aa20.19■□□□□ 0.82
CCDC61-201ENST00000536603 RSPH10BP0C881 870 aa20.19■□□□□ 0.82
CCDC61-201ENST00000536603 UGCGQ16739 394 aa20.19■□□□□ 0.82
CCDC61-201ENST00000536603 TAF2Q6P1X5 1199 aa20.19■□□□□ 0.82
CCDC61-201ENST00000536603 TRAF7Q6Q0C0 670 aa20.19■□□□□ 0.82
CCDC61-201ENST00000536603 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCDC61-201ENST00000536603 HSCBQ8IWL3 235 aa20.19■□□□□ 0.82
CCDC61-201ENST00000536603 NOL7Q9UMY1 257 aaKnown RBP20.19■□□□□ 0.82
CCDC61-201ENST00000536603 PCDHA12Q9UN75 941 aa20.19■□□□□ 0.82
CCDC61-201ENST00000536603 CTSHP09668 335 aa20.18■□□□□ 0.82
CCDC61-201ENST00000536603 TXKP42681 527 aa20.18■□□□□ 0.82
CCDC61-201ENST00000536603 TRAPPC10P48553 1259 aa20.18■□□□□ 0.82
CCDC61-201ENST00000536603 ZNF484Q5JVG2 852 aa20.18■□□□□ 0.82
CCDC61-201ENST00000536603 TTC38Q5R3I4 469 aa20.18■□□□□ 0.82
CCDC61-201ENST00000536603 MTHFD1LQ6UB35 978 aa20.18■□□□□ 0.82
CCDC61-201ENST00000536603 BANK1Q8NDB2 785 aa20.18■□□□□ 0.82
CCDC61-201ENST00000536603 DBF4BQ8NFT6 615 aa20.18■□□□□ 0.82
CCDC61-201ENST00000536603 DNAJB3Q8WWF6 145 aa20.18■□□□□ 0.82
CCDC61-201ENST00000536603 INTS4Q96HW7 963 aaKnown RBP20.18■□□□□ 0.82
CCDC61-201ENST00000536603 MTMR9Q96QG7 549 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms