RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SLCO1A2P46721 670 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 PTDSS1P48651 473 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 PEX5P50542 639 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 NEK3P51956 506 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 TSPY1Q01534 308 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 CD300CQ08708 224 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ZNF844Q08AG5 666 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ITGA7Q13683 1181 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 PKN1Q16512 942 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 TSR1Q2NL82 804 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 MUM1Q2TAK8 710 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 PAPD7Q5XG87 772 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 SLC2A7Q6PXP3 512 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 AACSQ86V21 672 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 RAPGEF4Q8WZA2 1011 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 FERMT2Q96AC1 680 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 IFT43Q96FT9 208 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 GBP5Q96PP8 586 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.05□□□□□ -1.76
MCF2-210ENST00000536274 AGPAT5Q9NUQ2 364 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 CLIC5Q9NZA1 410 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ADD3Q9UEY8 706 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 SALL4Q9UJQ4 1053 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 MYH14Q7Z406 1995 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 CARMIL3Q8ND23 1372 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 MYH2Q9UKX2 1941 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 SRCAPQ6ZRS2 3230 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 GCOM1H8Y6P7 765 aaPredicted RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 LIN7AO14910 233 aaPredicted RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 HIP1RO75146 1068 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 LUC7L3O95232 432 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 TFPTP0C1Z6 253 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 MYZAPP0CAP1 466 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 UBTFL1P0CB47 393 aaPredicted RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 ALADP13716 330 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 LMNB1P20700 586 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ATP6V1C1P21283 382 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 CTNNA1P35221 906 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 VAV2P52735 878 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 RTP1P59025 263 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 HAND2P61296 217 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 PPP2R2AP63151 447 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 GFPT1Q06210 699 aaPredicted RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 PABPC4Q13310 644 aaKnown RBP eCLIP4.05□□□□□ -1.76
MCF2-210ENST00000536274 MYBPC2Q14324 1141 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 VWA3BQ502W6 1294 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 GLE1Q53GS7 698 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 SULT6B1Q6IMI4 303 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 PHLDB3Q6NSJ2 640 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 WDR59Q6PJI9 974 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 UTS2BQ765I0 119 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 DAAM2Q86T65 1068 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 WDR75Q8IWA0 830 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 RIBC1Q8N443 379 aaPredicted RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 HPS3Q969F9 1004 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ABHD8Q96I13 439 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 MPP4Q96JB8 637 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 RMDN2Q96LZ7 410 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 FAM114A2Q9NRY5 505 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ZNHIT6Q9NWK9 470 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 VPS54Q9P1Q0 977 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 RNF14Q9UBS8 474 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 CTNND2Q9UQB3 1225 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 R3HDM2Q9Y2K5 976 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 LAMB2P55268 1798 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 COL3A1P02461 1466 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 A0A1W2PQ27 194 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 A0A1W2PQ64 194 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 A0A1W2PQD8 194 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 TMEM247A6NEH6 219 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 POM121CA8CG34 1229 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 IPO5O00410 1097 aaKnown RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 ZNF263O14978 683 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 ORC4O43929 436 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 PEX11AO75192 247 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 RPS6KA4O75676 772 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 STK10O94804 968 aaKnown RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 TUBBP07437 444 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 MMEP08473 750 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 GSTT2P0CG29 244 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 GSTT2BP0CG30 244 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 CMA1P23946 247 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 SMARCA1P28370 1054 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 RCVRNP35243 200 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 RGS19P49795 217 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 HDAC4P56524 1084 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 IFI35P80217 286 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 MRPS35P82673 323 aaKnown RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 ATP11AP98196 1134 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 PLS1Q14651 629 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 ACAP1Q15027 740 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 SETDB1Q15047 1291 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 ANKRD1Q15327 319 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 KRT71Q3SY84 523 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 CCDC92Q53HC0 331 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 RFWD3Q6PCD5 774 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 CYP26C1Q6V0L0 522 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 FITM2Q8N6M3 262 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 NLGN2Q8NFZ4 835 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 WDR60Q8WVS4 1066 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms