RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CNOT4O95628 575 aaKnown RBP5.11□□□□□ -1.59
USP48-215ENST00000534705 ASLP04424 464 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 AMY2AP04746 511 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 PDE6AP16499 860 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 AMY2BP19961 511 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 IGFALSP35858 605 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 TCEA2Q15560 299 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 CD276Q5ZPR3 534 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 VASNQ6EMK4 673 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 TCTN3Q6NUS6 607 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 FGD2Q7Z6J4 655 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 RALYLQ86SE5 291 aaKnown RBP5.11□□□□□ -1.59
USP48-215ENST00000534705 DTX3Q8N9I9 347 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 GIMAP8Q8ND71 665 aaPredicted RBP5.11□□□□□ -1.59
USP48-215ENST00000534705 LMF1Q96S06 567 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 KANSL2Q9H9L4 492 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 SMURF1Q9HCE7 757 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 INTS7Q9NVH2 962 aaKnown RBP5.11□□□□□ -1.59
USP48-215ENST00000534705 TNFRSF18Q9Y5U5 241 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 ATP23Q9Y6H3 246 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 SLC4A7Q9Y6M7 1214 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 ENPP3O14638 875 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 FOXS1O43638 330 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 DNAJC8O75937 253 aaPredicted RBP5.1□□□□□ -1.59
USP48-215ENST00000534705 RAPGEF3O95398 923 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 LTFP02788 710 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 SRGAP2CP0DJJ0 459 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 KCNA6P17658 529 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 PTPN1P18031 435 aaKnown RBP5.1□□□□□ -1.59
USP48-215ENST00000534705 GRIN1Q05586 938 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 C16orf86Q6ZW13 317 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 OVCH1Q7RTY7 1134 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 JAZF1Q86VZ6 243 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 PTRH1Q86Y79 214 aaKnown RBP5.1□□□□□ -1.59
USP48-215ENST00000534705 NOSTRINQ8IVI9 506 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 APPBP2Q92624 585 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 ZG16BQ96DA0 208 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 GNRHR2Q96P88 292 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 CD244Q9BZW8 370 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 PDS5BQ9NTI5 1447 aa5.1□□□□□ -1.59
USP48-215ENST00000534705 MAGEC2Q9UBF1 373 aaPredicted RBP5.1□□□□□ -1.59
USP48-215ENST00000534705 FANCD2Q9BXW9 1451 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 MRC2Q9UBG0 1479 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 ZNF839A8K0R7 811 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 ACOT7O00154 380 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 ASMTLO95671 621 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 ENO2P09104 434 aaPredicted RBP5.09□□□□□ -1.59
USP48-215ENST00000534705 COMTP21964 271 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 DNM2P50570 870 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 JAM2P57087 298 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 HERVK_113P62684 666 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 DBPQ10586 325 aaPredicted RBP5.09□□□□□ -1.59
USP48-215ENST00000534705 PABPC4Q13310 644 aaKnown RBP eCLIP5.09□□□□□ -1.59
USP48-215ENST00000534705 TMEM177Q53S58 311 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 IGFL4Q6B9Z1 124 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 ZCCHC8Q6NZY4 707 aaKnown RBP5.09□□□□□ -1.59
USP48-215ENST00000534705 ABHD17CQ6PCB6 329 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 OTOP1Q7RTM1 612 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 DDX53Q86TM3 631 aaKnown RBP5.09□□□□□ -1.59
USP48-215ENST00000534705 OSTM1Q86WC4 334 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 IFNL2Q8IZJ0 200 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 CISD2Q8N5K1 135 aaKnown RBP5.09□□□□□ -1.59
USP48-215ENST00000534705 CLUHP3Q96NS8 147 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 CRAMP1Q96RY5 1269 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 USP35Q9P2H5 1018 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 WASF3Q9UPY6 502 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 PLAAQ9Y263 795 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 COQ6Q9Y2Z9 468 aa5.09□□□□□ -1.59
USP48-215ENST00000534705 URB2Q14146 1524 aaKnown RBP5.08□□□□□ -1.6
USP48-215ENST00000534705 CEP164Q9UPV0 1460 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 FAM90A27PA6NNH2 459 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 PPP1R12AO14974 1030 aaPredicted RBP5.08□□□□□ -1.6
USP48-215ENST00000534705 CDC45O75419 566 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 C4BPAP04003 597 aaKnown RBP5.08□□□□□ -1.6
USP48-215ENST00000534705 MECP2P51608 486 aaKnown RBP5.08□□□□□ -1.6
USP48-215ENST00000534705 ARHGAP44Q17R89 818 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 BTBD8Q5XKL5 378 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 TMC5Q6UXY8 1006 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 EP400NLQ6ZTU2 488 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 Q6ZUG5 572 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 RBM12BQ8IXT5 1001 aaKnown RBP5.08□□□□□ -1.6
USP48-215ENST00000534705 NEU4Q8WWR8 484 aaPredicted RBP5.08□□□□□ -1.6
USP48-215ENST00000534705 EXTL1Q92935 676 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 FEZ1Q99689 392 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 ORAI3Q9BRQ5 295 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 FANCLQ9NW38 375 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 TBX22Q9Y458 520 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 B3GALT1Q9Y5Z6 326 aa5.08□□□□□ -1.6
USP48-215ENST00000534705 MRPL42Q9Y6G3 142 aaKnown RBP5.08□□□□□ -1.6
USP48-215ENST00000534705 SLC12A8A0AV02 714 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 COL6A1P12109 1028 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 KRT15P19012 456 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 AOAHP28039 575 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 SDHAP31040 664 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 FLT3P36888 993 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 SKIDA1Q1XH10 827 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 AGBL4Q5VU57 503 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 KIAA0907Q7Z7F0 614 aaPredicted RBP5.07□□□□□ -1.6
USP48-215ENST00000534705 TAX1BP1Q86VP1 789 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 IGSF22Q8N9C0 903 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms