RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	TRPV2	Q9Y5S1	764 aa		13.18	□□□□□ -0.3
CTNND1-238	ENST00000534647	DOCK5	Q9H7D0	1870 aa		13.18	□□□□□ -0.3
CTNND1-238	ENST00000534647	KAT6A	Q92794	2004 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	NLRC5	Q86WI3	1866 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	hCG_1984214	I3L0E3	225 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647		M0QZ92	97 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	MEIS1	O00470	390 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	ITGB1	P05556	798 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	ACTR2	P61160	394 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	COL9A3	Q14050	684 aa	Predicted RBP	13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	CEP55	Q53EZ4	464 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	PPP1R18	Q6NYC8	613 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	MTHFD1L	Q6UB35	978 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	NIPA1	Q7RTP0	329 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	EFHB	Q8N7U6	833 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	ZNF713	Q8N859	430 aa	Predicted RBP	13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	CYP2W1	Q8TAV3	490 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	KIF12	Q96FN5	646 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	MSLNL	Q96KJ4	702 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	SDF4	Q9BRK5	362 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	ALG13	Q9NP73	1137 aa	Known RBP	13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	CD207	Q9UJ71	328 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	MRPL42	Q9Y6G3	142 aa	Known RBP	13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	MYO7A	Q13402	2215 aa		13.17	□□□□□ -0.3
CTNND1-238	ENST00000534647	TBX10	O75333	385 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	SCG2	P13521	617 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	RXRA	P19793	462 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	DNAJB1	P25685	340 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	IGBP1	P78318	339 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	FUT2	Q10981	343 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	COASY	Q13057	564 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	CREB3L3	Q68CJ9	461 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	HEATR3	Q7Z4Q2	680 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	ESYT1	Q9BSJ8	1104 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	GLT8D2	Q9H1C3	349 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	AGO4	Q9HCK5	861 aa	Known RBP	13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	RBM28	Q9NW13	759 aa	Known RBP	13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	PKD2L1	Q9P0L9	805 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	TRPC6	Q9Y210	931 aa		13.16	□□□□□ -0.3
CTNND1-238	ENST00000534647	hCG_1642624	A0A1W2PR95	340 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	HBP1	O60381	514 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	AR	P10275	920 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	SREBF1	P36956	1147 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	SARS	P49591	514 aa	Known RBP	13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	KRT76	Q01546	638 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	UBE3A	Q05086	875 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	PAK2	Q13177	524 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	ITGB3BP	Q13352	177 aa	Predicted RBP	13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	AP3B2	Q13367	1082 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	ODR4	Q5SWX8	454 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	WWC2	Q6AWC2	1192 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	APOA5	Q6Q788	366 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	ABHD15	Q6UXT9	468 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	SYNE3	Q6ZMZ3	975 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	BMP8A	Q7Z5Y6	402 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	KLHL23	Q8NBE8	558 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	ZBTB10	Q96DT7	871 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	TMX1	Q9H3N1	280 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	CLEC1B	Q9P126	229 aa		13.15	□□□□□ -0.3
CTNND1-238	ENST00000534647	FSD2	A1L4K1	749 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	STXBP3	O00186	592 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	LINC01565	O15544	149 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	BRD1	O95696	1058 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	KLRC1	P26715	233 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	CLCN1	P35523	988 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	CLK2	P49760	499 aa	Known RBP	13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	RCAN1	P53805	252 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	EXOSC10	Q01780	885 aa	Known RBP	13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	CBX2	Q14781	532 aa	Predicted RBP	13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	TSGA10IP	Q3SY00	556 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	TYW1B	Q6NUM6	668 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	RNF135	Q8IUD6	432 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	KIAA0319L	Q8IZA0	1049 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	SMRP1	Q8NCR6	262 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	ATP8B4	Q8TF62	1192 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	TRAPPC12	Q8WVT3	735 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	CRYGN	Q8WXF5	182 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	EDA	Q92838	391 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	MFSD14A	Q96MC6	490 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	UIMC1	Q96RL1	719 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	ANO3	Q9BYT9	981 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	IGFLR1	Q9H665	355 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	RGS18	Q9NS28	235 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	C1orf112	Q9NSG2	853 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	BARHL2	Q9NY43	387 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	COL1A2	P08123	1366 aa		13.14	□□□□□ -0.31
CTNND1-238	ENST00000534647	CNTNAP5	Q8WYK1	1306 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	DHX15	O43143	795 aa	Known RBP	13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	CCNE2	O96020	404 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	CYP3A4	P08684	503 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	ADCY7	P51828	1080 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	NAPA	P54920	295 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	FAM189B	P81408	668 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	TMEM62	Q0P6H9	643 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	ZNF484	Q5JVG2	852 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	RNF20	Q5VTR2	975 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	FAM160B1	Q5W0V3	765 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	PDE12	Q6L8Q7	609 aa	Known RBP	13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms