RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 ZNF302Q9NR11 478 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 DISC1Q9NRI5 854 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 RGL1Q9NZL6 768 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 DDX25Q9UHL0 483 aaKnown RBP5.73□□□□□ -1.49
USH1C-210ENST00000534556 ZNF215Q9UL58 517 aaPredicted RBP5.73□□□□□ -1.49
USH1C-210ENST00000534556 NOC2LQ9Y3T9 749 aaKnown RBP5.73□□□□□ -1.49
USH1C-210ENST00000534556 PCDHA2Q9Y5H9 948 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 PCDHA11Q9Y5I1 949 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 PCDHA10Q9Y5I2 948 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 CITO14578 2027 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 MTCL1Q9Y4B5 1905 aaKnown RBP5.72□□□□□ -1.49
USH1C-210ENST00000534556 SMIM35A0A1B0GVV1 85 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 ENPP3O14638 875 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 BACH1O14867 736 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 HBP1O60381 514 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 CCNT1O60563 726 aaKnown RBP5.72□□□□□ -1.49
USH1C-210ENST00000534556 GAS7O60861 476 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 GPR32O75388 356 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 CSDE1O75534 798 aaKnown RBP5.72□□□□□ -1.49
USH1C-210ENST00000534556 CDKL5O76039 1030 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 GJB5O95377 273 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 PFKMP08237 780 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 KRT2P35908 639 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 CLCN3P51790 818 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 NPEPPSP55786 919 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 HTRA4P83105 476 aaPredicted RBP5.72□□□□□ -1.49
USH1C-210ENST00000534556 SETQ01105 290 aaPredicted RBP5.72□□□□□ -1.49
USH1C-210ENST00000534556 KRT76Q01546 638 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 PRKCEQ02156 737 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 PPP2R5CQ13362 524 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 PLA2G4FQ68DD2 849 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 PPP4R3AQ6IN85 833 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 GALNT17Q6IS24 598 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 MIS18BP1Q6P0N0 1132 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 CPLX2Q6PUV4 134 aaKnown RBP5.72□□□□□ -1.49
USH1C-210ENST00000534556 ANO5Q75V66 913 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 NEK8Q86SG6 692 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 FAM177A1Q8N128 213 aaPredicted RBP5.72□□□□□ -1.49
USH1C-210ENST00000534556 LRRC71Q8N4P6 559 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 CCDC155Q8N6L0 562 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 FBXO18Q8NFZ0 1043 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 TMX3Q96JJ7 454 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 MTMR9Q96QG7 549 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 RIT2Q99578 217 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 TEKT3Q9BXF9 490 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 ADAMTS10Q9H324 1103 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 RC3H2Q9HBD1 1191 aaKnown RBP5.72□□□□□ -1.49
USH1C-210ENST00000534556 ERVK-5Q9HDB9 667 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 TBC1D22BQ9NU19 505 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 HCSTQ9UBK5 93 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 PADI3Q9ULW8 664 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 TRPC6Q9Y210 931 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 GTF3C3Q9Y5Q9 886 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 PLXNA3P51805 1871 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 WDFY4Q6ZS81 3184 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 VWA8A3KMH1 1905 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 KDM3AQ9Y4C1 1321 aa5.72□□□□□ -1.49
USH1C-210ENST00000534556 C2orf16Q68DN1 1984 aa5.71□□□□□ -1.49
USH1C-210ENST00000534556 COL1A2P08123 1366 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 TMEM265A0A087WTH1 108 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 IGKV6-21A0A0C4DH24 114 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 CCDC194A0A1B0GVG4 234 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 ABHD14A-ACY1A0A1B0GW23 586 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 LINC01553A4QN01 128 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 RRN3P2A6NIE6 340 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 WDR64B1ANS9 1081 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 BAIAP3O94812 1187 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 SLITRK3O94933 977 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 UPP2O95045 317 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 OATP04181 439 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 PSAPP07602 524 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 GNAT1P11488 350 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 FGFR4P22455 802 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 IKBKEQ14164 716 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 DSC3Q14574 896 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 RABEP1Q15276 862 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 IL17AQ16552 155 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 ECM1Q16610 540 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 KIZQ2M2Z5 673 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 ZNF484Q5JVG2 852 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 FAM160B1Q5W0V3 765 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 TAF2Q6P1X5 1199 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 MIER3Q7Z3K6 550 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 FAM228AQ86W67 206 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 KSR1Q8IVT5 923 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 SMAP1Q8IYB5 467 aaPredicted RBP5.71□□□□□ -1.5
USH1C-210ENST00000534556 PHOSPHO2Q8TCD6 241 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 SP7Q8TDD2 431 aaPredicted RBP5.71□□□□□ -1.5
USH1C-210ENST00000534556 BBXQ8WY36 941 aaPredicted RBP5.71□□□□□ -1.5
USH1C-210ENST00000534556 TOP1MTQ969P6 601 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 DYDC2Q96IM9 177 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 SLC9A7Q96T83 725 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 LLPHQ9BRT6 129 aaKnown RBP5.71□□□□□ -1.5
USH1C-210ENST00000534556 C17orf80Q9BSJ5 609 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 NIFKQ9BYG3 293 aaKnown RBP5.71□□□□□ -1.5
USH1C-210ENST00000534556 IFIH1Q9BYX4 1025 aaKnown RBP5.71□□□□□ -1.5
USH1C-210ENST00000534556 CELF4Q9BZC1 486 aaKnown RBP5.71□□□□□ -1.5
USH1C-210ENST00000534556 AZI2Q9H6S1 392 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 RNF19AQ9NV58 838 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 SAMM50Q9Y512 469 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms