RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 FAM86C2PA6NEL3 165 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 EIF5BO60841 1220 aaKnown RBP15.91■□□□□ 0.14
SF3B2-215ENST00000534307 DTNBO60941 627 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 LARGE1O95461 756 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 TDP2O95551 362 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 PSAPP07602 524 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 KLRC1P26715 233 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 ERVK-21P61565 698 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 ME3Q16798 604 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 ZNF484Q5JVG2 852 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 MOXD1Q6UVY6 613 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 B3GNT9Q6UX72 402 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 TSHZ1Q6ZSZ6 1077 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 GJB4Q9NTQ9 266 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 KCNJ14Q9UNX9 436 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 TRPV2Q9Y5S1 764 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 LOXHD1Q8IVV2 1947 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 ZNF318Q5VUA4 2279 aa15.91■□□□□ 0.14
SF3B2-215ENST00000534307 WDR64B1ANS9 1081 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 ZNF862O60290 1169 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 GPR37L1O60883 481 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 PSMD10O75832 226 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 FDPSP14324 419 aaKnown RBP15.9■□□□□ 0.14
SF3B2-215ENST00000534307 GRB10Q13322 594 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 IER5Q5VY09 327 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 KRT40Q6A162 431 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 KIAA0319LQ8IZA0 1049 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 NME8Q8N427 588 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 ETNPPLQ8TBG4 499 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 LINC01599Q8WXQ3 324 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 BBXQ8WY36 941 aaPredicted RBP15.9■□□□□ 0.14
SF3B2-215ENST00000534307 GTF3C6Q969F1 213 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 GJA10Q969M2 543 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 TGS1Q96RS0 853 aaKnown RBP15.9■□□□□ 0.14
SF3B2-215ENST00000534307 TTC3P53804 2025 aa15.9■□□□□ 0.14
SF3B2-215ENST00000534307 C22orf31O95567 290 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 TMEM62Q0P6H9 643 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 NONOQ15233 471 aaKnown RBP eCLIP15.89■□□□□ 0.13
SF3B2-215ENST00000534307 LRCH2Q5VUJ6 765 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 KRT25Q7Z3Z0 450 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 CRIPAKQ8N1N5 446 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 NECAB1Q8N987 351 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 CELF4Q9BZC1 486 aaKnown RBP15.89■□□□□ 0.13
SF3B2-215ENST00000534307 UNC45AQ9H3U1 944 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 SUGCTQ9HAC7 445 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 RC3H2Q9HBD1 1191 aaKnown RBP15.89■□□□□ 0.13
SF3B2-215ENST00000534307 DISC1Q9NRI5 854 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 GABBR1Q9UBS5 961 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 EVPLQ92817 2033 aa15.89■□□□□ 0.13
SF3B2-215ENST00000534307 ENPP3O14638 875 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 SLC37A4O43826 429 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 GAS7O60861 476 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 CD52P31358 61 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 SFNP31947 248 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 NEK4P51957 841 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 JAK3P52333 1124 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 ST3GAL1Q11201 340 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 UGCGQ16739 394 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 INF2Q27J81 1249 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 ALYREFQ86V81 257 aaKnown RBP15.88■□□□□ 0.13
SF3B2-215ENST00000534307 LINC01465Q8N7H1 131 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 OXER1Q8TDS5 423 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 GDPD5Q8WTR4 605 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 TEKT3Q9BXF9 490 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 ORC3Q9UBD5 711 aaPredicted RBP15.88■□□□□ 0.13
SF3B2-215ENST00000534307 TCEAL9Q9UHQ7 104 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 PADI3Q9ULW8 664 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 COG5Q9UP83 839 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 CFAP54Q96N23 3096 aa15.88■□□□□ 0.13
SF3B2-215ENST00000534307 NLRC5Q86WI3 1866 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 M0QZ92 97 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 LINC00271P0C7V0 271 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 RTN4RL1Q86UN2 441 aaPredicted RBP15.87■□□□□ 0.13
SF3B2-215ENST00000534307 CKAP2LQ8IYA6 745 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 NSUN7Q8NE18 718 aaKnown RBP15.87■□□□□ 0.13
SF3B2-215ENST00000534307 RDM1Q8NG50 284 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 TNFRSF25Q93038 417 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 FAM167AQ96KS9 214 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 YME1L1Q96TA2 773 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 C17orf80Q9BSJ5 609 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 TMX1Q9H3N1 280 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 CDHR5Q9HBB8 845 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 DDX25Q9UHL0 483 aaKnown RBP15.87■□□□□ 0.13
SF3B2-215ENST00000534307 MTUS1Q9ULD2 1270 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 SAMM50Q9Y512 469 aa15.87■□□□□ 0.13
SF3B2-215ENST00000534307 RALGAPA2Q2PPJ7 1873 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 CHMP2AO43633 222 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 GTPBP6O43824 516 aaPredicted RBP15.86■□□□□ 0.13
SF3B2-215ENST00000534307 UPP2O95045 317 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 OATP04181 439 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 XBP1P17861 261 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 PRKCEQ02156 737 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 C8orf34Q49A92 452 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 EARS2Q5JPH6 523 aaKnown RBP15.86■□□□□ 0.13
SF3B2-215ENST00000534307 PPP4R3AQ6IN85 833 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 TMEM40Q8WWA1 233 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 WASF1Q92558 559 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 FTHL17Q9BXU8 183 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 KCNMB3Q9NPA1 279 aa15.86■□□□□ 0.13
SF3B2-215ENST00000534307 CD320Q9NPF0 282 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms