RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 CLIC4Q9Y696 253 aa13.87□□□□□ -0.19
CHRDL2-209ENST00000534276 PTPRSQ13332 1948 aa13.87□□□□□ -0.19
CHRDL2-209ENST00000534276 TOB1P50616 345 aaPredicted RBP13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 ZNF445P59923 1031 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 TFF2Q03403 129 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 PPFIA1Q13136 1202 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 NR5A1Q13285 461 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 ORC2Q13416 577 aaPredicted RBP13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 FAM26DQ5JW98 314 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 CAVIN1Q6NZI2 390 aaKnown RBP13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 TAF2Q6P1X5 1199 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 OXER1Q8TDS5 423 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 ADAMTS19Q8TE59 1207 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 GLG1Q92896 1179 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 TGS1Q96RS0 853 aaKnown RBP13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 MXRA8Q9BRK3 442 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 SUGCTQ9HAC7 445 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 KCNH7Q9NS40 1196 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 VCANP13611 3396 aa13.86□□□□□ -0.19
CHRDL2-209ENST00000534276 SMCO2A6NFE2 343 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 TNFRSF10AO00220 468 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 FOSP01100 380 aaPredicted RBP13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 MARK3P27448 753 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 ME1P48163 572 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 ADCY7P51828 1080 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 HTRA4P83105 476 aaPredicted RBP13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 GRIK4Q16099 956 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 CCDC183Q5T5S1 534 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 RUFY4Q6ZNE9 571 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 KRT25Q7Z3Z0 450 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 RPAINQ86UA6 219 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 CYP2W1Q8TAV3 490 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 GDPD5Q8WTR4 605 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 ANO3Q9BYT9 981 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 SMARCAD1Q9H4L7 1026 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 JPH1Q9HDC5 661 aaPredicted RBP13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 DDX19AQ9NUU7 478 aaKnown RBP13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 MTUS1Q9ULD2 1270 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 DOCK5Q9H7D0 1870 aa13.85□□□□□ -0.19
CHRDL2-209ENST00000534276 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 MBLAC1A4D2B0 266 aaPredicted RBP13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 CUTAO60888 179 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 CHRNA1P02708 482 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 BMP1P13497 986 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 CMA1P23946 247 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 CEBPZQ03701 1054 aaKnown RBP13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 AAK1Q2M2I8 961 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 CEP55Q53EZ4 464 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 MARCH8Q5T0T0 291 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 APBB2Q92870 758 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 TOP1MTQ969P6 601 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 PCYT2Q99447 389 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 IFIH1Q9BYX4 1025 aaKnown RBP13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 LMCD1Q9NZU5 365 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 TMEM63CQ9P1W3 806 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 SLC9A2Q9UBY0 812 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 TUBE1Q9UJT0 475 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 PCDHA7Q9UN72 937 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 NFASCO94856 1347 aa13.84□□□□□ -0.19
CHRDL2-209ENST00000534276 FAM237AA0A1B0GTK4 181 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 CCDC194A0A1B0GVG4 234 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 MEIS1O00470 390 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 ARP10275 920 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 SREBF1P36956 1147 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 AP3B2Q13367 1082 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 ZSCAN23Q3MJ62 389 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 RSPH3Q86UC2 560 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 UHRF1Q96T88 793 aaPredicted RBP13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 SDF4Q9BRK5 362 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 TMEM260Q9NX78 707 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 COG5Q9UP83 839 aa13.83□□□□□ -0.2
CHRDL2-209ENST00000534276 RRN3P2A6NIE6 340 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 LAD1O00515 517 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 GHRP10912 638 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 INSRRP14616 1297 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 CLK2P49760 499 aaKnown RBP13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 KCNQ1P51787 676 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 ACTR2P61160 394 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 MGAT3Q09327 533 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 ITGB3BPQ13352 177 aaPredicted RBP13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 TTC38Q5R3I4 469 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 AXDND1Q5T1B0 1012 aaPredicted RBP13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 CCDC73Q6ZRK6 1079 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 KRI1Q8N9T8 703 aaKnown RBP13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 MRPS27Q92552 414 aaKnown RBP13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 YME1L1Q96TA2 773 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 C17orf80Q9BSJ5 609 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 AZI2Q9H6S1 392 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 AGO4Q9HCK5 861 aaKnown RBP13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 SRPRBQ9Y5M8 271 aaKnown RBP13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 BRWD1Q9NSI6 2320 aa13.82□□□□□ -0.2
CHRDL2-209ENST00000534276 UPP2O95045 317 aa13.81□□□□□ -0.2
CHRDL2-209ENST00000534276 IGBP1P78318 339 aa13.81□□□□□ -0.2
CHRDL2-209ENST00000534276 FAM160A1Q05DH4 1040 aa13.81□□□□□ -0.2
CHRDL2-209ENST00000534276 LPIN1Q14693 890 aa13.81□□□□□ -0.2
CHRDL2-209ENST00000534276 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHRDL2-209ENST00000534276 ARL6IP4Q66PJ3 421 aaKnown RBP13.81□□□□□ -0.2
CHRDL2-209ENST00000534276 PIK3AP1Q6ZUJ8 805 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms