RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 RFC2P35250 354 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 TRAPPC10P48553 1259 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 MGAT3Q09327 533 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 DRP2Q13474 957 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 TARBP2Q15633 366 aaKnown RBP15.03■□□□□ -0
CMTM1-219ENST00000533953 LRIT3Q3SXY7 679 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 XKR3Q5GH77 459 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 FAM26DQ5JW98 314 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 RASIP1Q5U651 963 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 FOXD4L5Q5VV16 416 aaPredicted RBP15.03■□□□□ -0
CMTM1-219ENST00000533953 TAF2Q6P1X5 1199 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 FOXD4L4Q8WXT5 416 aaPredicted RBP15.03■□□□□ -0
CMTM1-219ENST00000533953 TNPO1Q92973 898 aaKnown RBP15.03■□□□□ -0
CMTM1-219ENST00000533953 CEP89Q96ST8 783 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 LXNQ9BS40 222 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 SUGCTQ9HAC7 445 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.03■□□□□ -0
CMTM1-219ENST00000533953 BMP2KQ9NSY1 1161 aaPredicted RBP15.03■□□□□ -0
CMTM1-219ENST00000533953 GINS2Q9Y248 185 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 SCN5AQ14524 2016 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 SMIM35A0A1B0GVV1 85 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 CXCL10P02778 98 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 VTNP04004 478 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 PBX2P40425 430 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 RABGGTBP53611 331 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 MRPS6P82932 125 aaKnown RBP15.02■□□□□ -0
CMTM1-219ENST00000533953 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
CMTM1-219ENST00000533953 LPIN1Q14693 890 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 EFCAB12Q6NXP0 572 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 FAM167AQ96KS9 214 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 HSD17B14Q9BPX1 270 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 NIFKQ9BYG3 293 aaKnown RBP15.02■□□□□ -0
CMTM1-219ENST00000533953 AGO3Q9H9G7 860 aaKnown RBP15.02■□□□□ -0
CMTM1-219ENST00000533953 MTMR6Q9Y217 621 aa15.02■□□□□ -0
CMTM1-219ENST00000533953 COL1A2P08123 1366 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 PP2D1A8MPX8 630 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 MED24O75448 989 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 SPATA31C1P0DKV0 1188 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 CDC25AP30304 524 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 RESTQ13127 1097 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 KIZQ2M2Z5 673 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.01□□□□□ -0.01
CMTM1-219ENST00000533953 Q7L0L9 218 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 RPAINQ86UA6 219 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 RSPH3Q86UC2 560 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 PIGOQ8TEQ8 1089 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 SLC4A7Q9Y6M7 1214 aa15.01□□□□□ -0.01
CMTM1-219ENST00000533953 PFKMP08237 780 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 MYOGP15173 224 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 PDCP20941 246 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 DEFB103AP81534 67 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 TBC1D8BQ0IIM8 1120 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 ECM1Q16610 540 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 TMEM266Q2M3C6 531 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 PLEKHG4Q58EX7 1191 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 RILPL1Q5EBL4 403 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 FBXO47Q5MNV8 452 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 CNKSR3Q6P9H4 555 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 CATSPER3Q86XQ3 398 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 LINC01465Q8N7H1 131 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 TET1Q8NFU7 2136 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 TMEM40Q8WWA1 233 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 CEP170P1Q96L14 293 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 CELF4Q9BZC1 486 aaKnown RBP15□□□□□ -0.01
CMTM1-219ENST00000533953 ZSWIM4Q9H7M6 989 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 CYP26B1Q9NR63 512 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 TRPV2Q9Y5S1 764 aa15□□□□□ -0.01
CMTM1-219ENST00000533953 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.99□□□□□ -0.01
CMTM1-219ENST00000533953 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.99□□□□□ -0.01
CMTM1-219ENST00000533953 MAGEB2O15479 319 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 CAND2O75155 1236 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 HSP90AA1P07900 732 aaKnown RBP14.99□□□□□ -0.01
CMTM1-219ENST00000533953 ACTN1P12814 892 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 CD52P31358 61 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 YWHABP31946 246 aaKnown RBP14.99□□□□□ -0.01
CMTM1-219ENST00000533953 XKR9Q5GH70 373 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 IER5Q5VY09 327 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 FAM117BQ6P1L5 589 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 KSR1Q8IVT5 923 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 C4orf19Q8IY42 314 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 FAM161BQ96MY7 647 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 CEP131Q9UPN4 1083 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 AKT3Q9Y243 479 aa14.99□□□□□ -0.01
CMTM1-219ENST00000533953 STX6O43752 255 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 GPR32O75388 356 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 CSDE1O75534 798 aaKnown RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 PARNO95453 639 aaKnown RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 ATP2A2P16615 1042 aaKnown RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 NLRP11P59045 1033 aaKnown RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 WDR5P61964 334 aaKnown RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 CEBPZQ03701 1054 aaKnown RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 ORC2Q13416 577 aaPredicted RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 PKP1Q13835 747 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 IKBKEQ14164 716 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 POTEGQ6S5H5 508 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 NME8Q8N427 588 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 SEPT8Q92599 483 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 TMEM143Q96AN5 459 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 OSMRQ99650 979 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 PBX4Q9BYU1 374 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms