RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 SBF2Q86WG5 1849 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 MYO1FO00160 1098 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 DAPK3O43293 454 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 KIAA0754O94854 1291 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 HSD17B3P37058 310 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 SLC12A3P55017 1021 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 HDLBPQ00341 1268 aaKnown RBP21.09■□□□□ 0.97
CAPN1-226ENST00000533820 GIT2Q14161 759 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 OTUD6BQ8N6M0 293 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 PIGOQ8TEQ8 1089 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 SEPT11Q9NVA2 429 aaKnown RBP21.09■□□□□ 0.97
CAPN1-226ENST00000533820 RGL1Q9NZL6 768 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 NOC2LQ9Y3T9 749 aaKnown RBP21.09■□□□□ 0.97
CAPN1-226ENST00000533820 GAKO14976 1311 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 GOLGA6L10A6NI86 522 aa21.08■□□□□ 0.97
CAPN1-226ENST00000533820 CALRP27797 417 aaKnown RBP21.08■□□□□ 0.97
CAPN1-226ENST00000533820 TMOD1P28289 359 aa21.08■□□□□ 0.97
CAPN1-226ENST00000533820 POLD1P28340 1107 aa21.08■□□□□ 0.97
CAPN1-226ENST00000533820 CTNNA1P35221 906 aaKnown RBP21.08■□□□□ 0.97
CAPN1-226ENST00000533820 INHBEP58166 350 aa21.08■□□□□ 0.97
CAPN1-226ENST00000533820 SEPT2Q15019 361 aa21.08■□□□□ 0.97
CAPN1-226ENST00000533820 GCNT4Q9P109 453 aa21.08■□□□□ 0.97
CAPN1-226ENST00000533820 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.08■□□□□ 0.97
CAPN1-226ENST00000533820 NOVP48745 357 aa21.08■□□□□ 0.97
CAPN1-226ENST00000533820 KNOP1Q1ED39 458 aaKnown RBP21.08■□□□□ 0.97
CAPN1-226ENST00000533820 DNM3Q9UQ16 869 aa21.08■□□□□ 0.97
CAPN1-226ENST00000533820 CDK5RAP2Q96SN8 1893 aa21.08■□□□□ 0.96
CAPN1-226ENST00000533820 CHMP2AO43633 222 aa21.08■□□□□ 0.96
CAPN1-226ENST00000533820 ZBTB39O15060 712 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 SERPINB2P05120 415 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 ELF1P32519 619 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 USP11P51784 963 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 ARHGAP4P98171 946 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 CD248Q9HCU0 757 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 OSGEPQ9NPF4 335 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 IGKV6D-41A0A0C4DH26 115 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 TTI1O43156 1089 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 PPP1R37O75864 691 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 GCFC2P16383 781 aaKnown RBP21.07■□□□□ 0.96
CAPN1-226ENST00000533820 USP8P40818 1118 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 IFT88Q13099 833 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 KDM7AQ6ZMT4 941 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 WHAMMQ8TF30 809 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 FAM163AQ96GL9 167 aaPredicted RBP21.07■□□□□ 0.96
CAPN1-226ENST00000533820 LRRC4CQ9HCJ2 640 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 FBXL5Q9UKA1 691 aa21.07■□□□□ 0.96
CAPN1-226ENST00000533820 EEF2P13639 858 aaKnown RBP21.06■□□□□ 0.96
CAPN1-226ENST00000533820 SETQ01105 290 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-226ENST00000533820 UAP1Q16222 522 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-226ENST00000533820 TBC1D22AQ8WUA7 517 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 CCT8L2Q96SF2 557 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 RUSC1Q9BVN2 902 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.06■□□□□ 0.961e-7■■■■■ 67.7
CAPN1-226ENST00000533820 ATF5Q9Y2D1 282 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-226ENST00000533820 ZC2HC1CQ53FD0 456 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-226ENST00000533820 GPATCH4Q5T3I0 446 aaKnown RBP21.06■□□□□ 0.96
CAPN1-226ENST00000533820 TPCN2Q8NHX9 752 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 ZNF473Q8WTR7 871 aaKnown RBP21.06■□□□□ 0.96
CAPN1-226ENST00000533820 NR2E1Q9Y466 385 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 FAM86B1E9PN63 330 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 NR3C1P04150 777 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 FAM86B2P0C5J1 330 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 MDH1P40925 334 aaKnown RBP21.06■□□□□ 0.96
CAPN1-226ENST00000533820 PTGISQ16647 500 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 GLYCTKQ8IVS8 523 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 KIRREL3Q8IZU9 778 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 RBM17Q96I25 401 aaKnown RBP21.06■□□□□ 0.96
CAPN1-226ENST00000533820 EPN3Q9H201 632 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 KCNMB3Q9NPA1 279 aa21.06■□□□□ 0.96
CAPN1-226ENST00000533820 DCDC2CA8MYV0 355 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 GCOM1H8Y6P7 765 aaPredicted RBP21.05■□□□□ 0.96
CAPN1-226ENST00000533820 PGRMC1O00264 195 aaKnown RBP21.05■□□□□ 0.96
CAPN1-226ENST00000533820 ATP2C2O75185 946 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 H2AFZP0C0S5 128 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 MYZAPP0CAP1 466 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 ECHS1P30084 290 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 PLS1Q14651 629 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 H2AFVQ71UI9 128 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 RDH13Q8NBN7 331 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 TRIM51Q9BSJ1 452 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 SPATA31C1P0DKV0 1188 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 CTTNQ14247 550 aaKnown RBP21.05■□□□□ 0.96
CAPN1-226ENST00000533820 CDC42EP5Q6NZY7 148 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 LRRC57Q8N9N7 239 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 ISCUQ9H1K1 167 aa21.05■□□□□ 0.96
CAPN1-226ENST00000533820 G3V3G9 751 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 DDX3XO00571 662 aaKnown RBP eCLIP21.04■□□□□ 0.963e-11■■■■■ 33.2
CAPN1-226ENST00000533820 FLOT1O75955 427 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 GDF11O95390 407 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 NMT1P30419 496 aaKnown RBP21.04■□□□□ 0.96
CAPN1-226ENST00000533820 RBM5P52756 815 aaKnown RBP eCLIP21.04■□□□□ 0.96
CAPN1-226ENST00000533820 MARSP56192 900 aaKnown RBP21.04■□□□□ 0.96
CAPN1-226ENST00000533820 UBXN2AP68543 259 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 ZNF211Q13398 564 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-226ENST00000533820 COG2Q14746 738 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 EDRF1Q3B7T1 1238 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 HYIQ5T013 277 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 DCAF8Q5TAQ9 597 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 SLFN13Q68D06 897 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 NLRP14Q86W24 1093 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms