RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
BDNF-218ENST00000533246 NMT1P30419 496 aaKnown RBP13.22□□□□□ -0.29
BDNF-218ENST00000533246 MAPK4P31152 587 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 EPHB4P54760 987 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 NNTQ13423 1086 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 NR1I3Q14994 352 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 ADSSL1Q8N142 457 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 RIN2Q8WYP3 895 aaPredicted RBP13.22□□□□□ -0.29
BDNF-218ENST00000533246 RMDN3Q96TC7 470 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 SNX24Q9Y343 169 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 DIP2AQ14689 1571 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 SLC16A4O15374 487 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 GAP43P17677 238 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 ALDH3A1P30838 453 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 HSPA1LP34931 641 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 PDCLQ13371 301 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 Q3C1V9 767 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 PDXDC2PQ6P474 469 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 TTLL6Q8N841 843 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 SMC6Q96SB8 1091 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 GOLPH3Q9H4A6 298 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 TECPR2O15040 1411 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 GYPCP04921 128 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 ACTN1P12814 892 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 SLC8A1P32418 973 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 MAP3K9P80192 1104 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 TAOK1Q7L7X3 1001 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 GLYCTKQ8IVS8 523 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 GJD4Q96KN9 370 aaPredicted RBP13.22□□□□□ -0.29
BDNF-218ENST00000533246 ACCSQ96QU6 501 aa13.22□□□□□ -0.29
BDNF-218ENST00000533246 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
BDNF-218ENST00000533246 ABCB11O95342 1321 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 MROH2AA6NES4 1674 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 PVALEFA0A1B0GWK0 134 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 MFAP3P55082 362 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 NTRK3Q16288 839 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 RCSD1Q6JBY9 416 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 GUF1Q8N442 669 aaKnown RBP13.21□□□□□ -0.29
BDNF-218ENST00000533246 ATP6V0A1Q93050 837 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 CNTNAP5Q8WYK1 1306 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 KDM6AO15550 1401 aaPredicted RBP13.21□□□□□ -0.29
BDNF-218ENST00000533246 ZBTB7AO95365 584 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 ECEL1O95672 775 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 SSTR3P32745 418 aaPredicted RBP13.21□□□□□ -0.29
BDNF-218ENST00000533246 PPP2R5CQ13362 524 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 CRYMQ14894 314 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 TRIM68Q6AZZ1 485 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 SLC30A9Q6PML9 568 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 SCARA5Q6ZMJ2 495 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.29
BDNF-218ENST00000533246 hCG_1984214I3L0E3 225 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 PLA2G4AP47712 749 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 PRAMEF18Q5VWM3 479 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 PADI6Q6TGC4 694 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 CACNA2D3Q8IZS8 1091 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 ZNF713Q8N859 430 aaPredicted RBP13.21□□□□□ -0.3
BDNF-218ENST00000533246 MS4A14Q96JA4 679 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 ZNF512BQ96KM6 892 aaPredicted RBP13.21□□□□□ -0.3
BDNF-218ENST00000533246 ZMAT2Q96NC0 199 aaKnown RBP13.21□□□□□ -0.3
BDNF-218ENST00000533246 HEMGNQ9BXL5 484 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 CCSER1Q9C0I3 900 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 STIM2Q9P246 746 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 NOD1Q9Y239 953 aa13.21□□□□□ -0.3
BDNF-218ENST00000533246 EIF4E1BA6NMX2 242 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 N4BP1O75113 896 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 ASNSP08243 561 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 SLC30A10Q6XR72 485 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 PASD1Q8IV76 773 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 ZBTB8OSQ8IWT0 167 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 AS3MTQ9HBK9 375 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 LIMA1Q9UHB6 759 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 GOLGA8KD6RF30 607 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 PDHBP11177 359 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 ZNF543Q08ER8 600 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 IFRD2Q12894 506 aaPredicted RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 BFSP1Q12934 665 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 LAMB3Q13751 1172 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 KNOP1Q1ED39 458 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 SGO2Q562F6 1265 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 ILDR1Q86SU0 546 aaPredicted RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 THNSL1Q8IYQ7 743 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 HAUS1Q96CS2 278 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 CD248Q9HCU0 757 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 SPATA31A1Q5TZJ5 1347 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 PXDNLA1KZ92 1463 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 IPO5O00410 1097 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 NDUFB10O96000 172 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 CLTAP09496 248 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 ATP5DP30049 168 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 CLUL1Q15846 466 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 FAM47CQ5HY64 1035 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms