RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 GANQ9H2C0 597 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.13■□□□□ 0.173e-6■■■■■ 38.5
CAPN1-224ENST00000533129 CRYMQ14894 314 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 TMEM119Q4V9L6 283 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 CCDC125Q86Z20 511 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 TLCD1Q96CP7 247 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 PDGFDQ9GZP0 370 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-224ENST00000533129 KLRF2D3W0D1 207 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 F8VZ95 297 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 SSBP05455 408 aaKnown RBP eCLIP16.12■□□□□ 0.17
CAPN1-224ENST00000533129 EIF3BP55884 814 aaKnown RBP16.12■□□□□ 0.17
CAPN1-224ENST00000533129 RHBDL3P58872 404 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 ARID5AQ03989 594 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 PDIA5Q14554 519 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 KRT71Q3SY84 523 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 SOGA3Q5TF21 947 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 RASGEF1CQ8N431 466 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 CCDC26Q8TAB7 109 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 CHMP6Q96FZ7 201 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 DDX47Q9H0S4 455 aaKnown RBP16.12■□□□□ 0.17
CAPN1-224ENST00000533129 FAM114A2Q9NRY5 505 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 DAGLAQ9Y4D2 1042 aa16.12■□□□□ 0.17
CAPN1-224ENST00000533129 DDX60LQ5H9U9 1706 aaKnown RBP16.12■□□□□ 0.17
CAPN1-224ENST00000533129 SNED1Q8TER0 1413 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 USP17L3A6NCW0 530 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 USP17L4A6NCW7 530 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 SCP2P22307 547 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 FLT3P36888 993 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 COASYQ13057 564 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 GRIPAP1Q4V328 841 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 ERMARDQ5T6L9 678 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 TLDC1Q6P9B6 456 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 USP17L1Q7RTZ2 530 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 REXO1Q8N1G1 1221 aaKnown RBP16.11■□□□□ 0.17
CAPN1-224ENST00000533129 CERS5Q8N5B7 392 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 SUPT20HQ8NEM7 779 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 TMEM47Q9BQJ4 181 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 AP1M1Q9BXS5 423 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 BZW2Q9Y6E2 419 aaKnown RBP16.11■□□□□ 0.17
CAPN1-224ENST00000533129 ESYT2A0FGR8 921 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 KRIT1O00522 736 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 DAPK3O43293 454 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 TSPY3P0CV98 308 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 TSPY8P0CW00 308 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 FKBP1AP62942 108 aaKnown RBP16.11■□□□□ 0.17
CAPN1-224ENST00000533129 KRT79Q5XKE5 535 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 MAPKAPK5Q8IW41 473 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 METTL13Q8N6R0 699 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 FAM129AQ9BZQ8 928 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 MKNK2Q9HBH9 465 aa16.11■□□□□ 0.17
CAPN1-224ENST00000533129 PHF20L1A8MW92 1017 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 DCDC2CA8MYV0 355 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 F8W031 263 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-224ENST00000533129 PPIP5K2O43314 1243 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 FAM26FQ5R3K3 315 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 SNX29Q8TEQ0 813 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 DNAJC19Q96DA6 116 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 XPO6Q96QU8 1125 aaKnown RBP16.1■□□□□ 0.17
CAPN1-224ENST00000533129 ZNF287Q9HBT7 754 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-224ENST00000533129 CDK5RAP2Q96SN8 1893 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 GSTA1P08263 222 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 PTK2Q05397 1052 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 CCDC197Q8NCU1 140 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 DBNDD1Q9H9R9 158 aa16.1■□□□□ 0.17
CAPN1-224ENST00000533129 A0A1B0GUA9 196 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 CCT8L1PA6NM43 557 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 BACH1O14867 736 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 GOLGA8HP0CJ92 632 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 ANXA13P27216 316 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 ELF3P78545 371 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-224ENST00000533129 DHX9Q08211 1270 aaKnown RBP16.09■□□□□ 0.17
CAPN1-224ENST00000533129 IRF2BP2Q7Z5L9 587 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 SLFN11Q7Z7L1 901 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 ZC3H3Q8IXZ2 948 aaKnown RBP16.09■□□□□ 0.17
CAPN1-224ENST00000533129 TPCN2Q8NHX9 752 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 LMBR1Q8WVP7 490 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 SUCLA2Q9P2R7 463 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-224ENST00000533129 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-224ENST00000533129 AMACRQ9UHK6 382 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 PPFIA2O75334 1257 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 ATP6V1G2O95670 118 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 SMARCA1P28370 1054 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 SLC4A8Q2Y0W8 1093 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 STRIP1Q5VSL9 837 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 HHIPL2Q6UWX4 724 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 ZNF571Q7Z3V5 609 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-224ENST00000533129 KCNK18Q7Z418 384 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 HOOK3Q86VS8 718 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 TXLNGYQ9BZA5 131 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 SEC63Q9UGP8 760 aaKnown RBP16.09■□□□□ 0.17
CAPN1-224ENST00000533129 NAGPAQ9UK23 515 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 MTMR7Q9Y216 660 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 UTP11Q9Y3A2 253 aaKnown RBP16.09■□□□□ 0.17
CAPN1-224ENST00000533129 POTEMA6NI47 508 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 OPLAHO14841 1288 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 ECE2O60344 883 aa16.09■□□□□ 0.17
CAPN1-224ENST00000533129 EPS15P42566 896 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms