RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 GHRP10912 638 aa17.3■□□□□ 0.36
CPSF1-210ENST00000532935 TMEM62Q0P6H9 643 aa17.3■□□□□ 0.36
CPSF1-210ENST00000532935 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
CPSF1-210ENST00000532935 SLFN12Q8IYM2 578 aa17.3■□□□□ 0.36
CPSF1-210ENST00000532935 NME8Q8N427 588 aa17.3■□□□□ 0.36
CPSF1-210ENST00000532935 APBB2Q92870 758 aa17.3■□□□□ 0.36
CPSF1-210ENST00000532935 IFIH1Q9BYX4 1025 aaKnown RBP17.3■□□□□ 0.36
CPSF1-210ENST00000532935 FOXP1Q9H334 677 aaPredicted RBP17.3■□□□□ 0.36
CPSF1-210ENST00000532935 NRBP2Q9NSY0 501 aa17.3■□□□□ 0.36
CPSF1-210ENST00000532935 TRPV2Q9Y5S1 764 aa17.3■□□□□ 0.36
CPSF1-210ENST00000532935 ARID2Q68CP9 1835 aa17.3■□□□□ 0.36
CPSF1-210ENST00000532935 M0QZ92 97 aa17.29■□□□□ 0.36
CPSF1-210ENST00000532935 EML1O00423 815 aa17.29■□□□□ 0.36
CPSF1-210ENST00000532935 WNT7AO00755 349 aa17.29■□□□□ 0.36
CPSF1-210ENST00000532935 LPIN1Q14693 890 aa17.29■□□□□ 0.36
CPSF1-210ENST00000532935 FBXO47Q5MNV8 452 aa17.29■□□□□ 0.36
CPSF1-210ENST00000532935 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.29■□□□□ 0.36
CPSF1-210ENST00000532935 TMCO2Q7Z6W1 182 aaPredicted RBP17.29■□□□□ 0.36
CPSF1-210ENST00000532935 KIAA0319LQ8IZA0 1049 aa17.29■□□□□ 0.36
CPSF1-210ENST00000532935 CDX2Q99626 313 aaPredicted RBP17.29■□□□□ 0.36
CPSF1-210ENST00000532935 SLC28A3Q9HAS3 691 aa17.29■□□□□ 0.36
CPSF1-210ENST00000532935 STXBP5LQ9Y2K9 1186 aa17.29■□□□□ 0.36
CPSF1-210ENST00000532935 KIF28PB7ZC32 967 aa17.28■□□□□ 0.36
CPSF1-210ENST00000532935 GRIN2CQ14957 1233 aa17.28■□□□□ 0.36
CPSF1-210ENST00000532935 CALCRLQ16602 461 aa17.28■□□□□ 0.36
CPSF1-210ENST00000532935 TSHZ1Q6ZSZ6 1077 aa17.28■□□□□ 0.36
CPSF1-210ENST00000532935 BANK1Q8NDB2 785 aa17.28■□□□□ 0.36
CPSF1-210ENST00000532935 CELF4Q9BZC1 486 aaKnown RBP17.28■□□□□ 0.36
CPSF1-210ENST00000532935 SEPT9Q9UHD8 586 aaPredicted RBP17.28■□□□□ 0.36
CPSF1-210ENST00000532935 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
CPSF1-210ENST00000532935 KDM3AQ9Y4C1 1321 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 MAGEB2O15479 319 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 TLL1O43897 1013 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 NEMFO60524 1076 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 STBD1O95210 358 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 AMHP03971 560 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 CA3P07451 260 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 PSMC5P62195 406 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
CPSF1-210ENST00000532935 XKR3Q5GH77 459 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 PPP2R2DQ66LE6 453 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 METTL13Q8N6R0 699 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 MYLIPQ8WY64 445 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 ZBED2Q9BTP6 218 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 NIFKQ9BYG3 293 aaKnown RBP17.27■□□□□ 0.36
CPSF1-210ENST00000532935 KIF3AQ9Y496 699 aa17.27■□□□□ 0.36
CPSF1-210ENST00000532935 TTC3P53804 2025 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.26■□□□□ 0.35
CPSF1-210ENST00000532935 GJB5O95377 273 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 P4HBP07237 508 aaKnown RBP17.26■□□□□ 0.35
CPSF1-210ENST00000532935 QARSP47897 775 aaKnown RBP17.26■□□□□ 0.35
CPSF1-210ENST00000532935 CLCN3P51790 818 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 SPIRE1Q08AE8 756 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 EPHA7Q15375 998 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 TARBP2Q15633 366 aaKnown RBP17.26■□□□□ 0.35
CPSF1-210ENST00000532935 NCAPH2Q6IBW4 605 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 EFCAB12Q6NXP0 572 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 FAM117BQ6P1L5 589 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 NOSTRINQ8IVI9 506 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 MYOCDQ8IZQ8 938 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 LINC01465Q8N7H1 131 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 USP38Q8NB14 1042 aa17.26■□□□□ 0.35
CPSF1-210ENST00000532935 AGO3Q9H9G7 860 aaKnown RBP17.26■□□□□ 0.35
CPSF1-210ENST00000532935 NLRC5Q86WI3 1866 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 TMEM150BA6NC51 233 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 DDX11L8A8MPP1 907 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 DKC1O60832 514 aaKnown RBP eCLIP17.25■□□□□ 0.35
CPSF1-210ENST00000532935 TMOD1P28289 359 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 CD52P31358 61 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 MCM7P33993 719 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 TBC1D8BQ0IIM8 1120 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 MTERF2Q49AM1 385 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 LRRC71Q8N4P6 559 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 MTMR9Q96QG7 549 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 RAD9AQ99638 391 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 TMEM60Q9H2L4 133 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 GINS2Q9Y248 185 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 PRUNE2Q8WUY3 3088 aa17.25■□□□□ 0.35
CPSF1-210ENST00000532935 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 VTNP04004 478 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 U2AF2P26368 475 aaKnown RBP eCLIP17.24■□□□□ 0.35
CPSF1-210ENST00000532935 GJB2P29033 226 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 TXKP42681 527 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 ANO5Q75V66 913 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 CEP89Q96ST8 783 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 MAP7D2Q96T17 732 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 PPP1R16BQ96T49 567 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 SH2D3AQ9BRG2 576 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 LXNQ9BS40 222 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 PRDM12Q9H4Q4 367 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 TTC12Q9H892 705 aaPredicted RBP17.24■□□□□ 0.35
CPSF1-210ENST00000532935 SUGCTQ9HAC7 445 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 CDHR5Q9HBB8 845 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 RGL1Q9NZL6 768 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 WRAP73Q9P2S5 460 aaPredicted RBP17.24■□□□□ 0.35
CPSF1-210ENST00000532935 PADI3Q9ULW8 664 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 AKT3Q9Y243 479 aa17.24■□□□□ 0.35
CPSF1-210ENST00000532935 LCHNA4D1U4 455 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms