RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 NCAPH2Q6IBW4 605 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 C4orf19Q8IY42 314 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 ZNF579Q8NAF0 562 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 DYDC2Q96IM9 177 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 RNPC3Q96LT9 517 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 EIF2AK1Q9BQI3 630 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 NOL7Q9UMY1 257 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 POTEMA6NI47 508 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 LYPLA2O95372 231 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 OR52Z1P0C646 297 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 SPATA31C1P0DKV0 1188 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 PTGDRQ13258 359 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 RILPL1Q5EBL4 403 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 DBF4BQ8NFT6 615 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 SH2D3AQ9BRG2 576 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 FAM49AQ9H0Q0 323 aaPredicted RBP15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 CDHR5Q9HBB8 845 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 MTMR6Q9Y217 621 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 MICAL3Q7RTP6 2002 aa15.65■□□□□ 0.1
TSPAN4-220ENST00000532375 MAGEB2O15479 319 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 PDCP20941 246 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 TECP42680 631 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 FXR2P51116 673 aaKnown RBP eCLIP15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 MRPS6P82932 125 aaKnown RBP15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 CTTNQ14247 550 aaKnown RBP15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 LPIN1Q14693 890 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 FBXO47Q5MNV8 452 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 NME8Q8N427 588 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 GBF1Q92538 1859 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 LXNQ9BS40 222 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 CEP131Q9UPN4 1083 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 CDY2AQ9Y6F7 541 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 KDM3AQ9Y4C1 1321 aa15.64■□□□□ 0.09
TSPAN4-220ENST00000532375 DDX11L8A8MPP1 907 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 GRXCR1A8MXD5 290 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 RPLP2P05387 115 aaKnown RBP15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 NPEPPSP55786 919 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 SMAD3P84022 425 aaKnown RBP15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 CYP4A11Q02928 519 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 TMEM62Q0P6H9 643 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 RESTQ13127 1097 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 DRP2Q13474 957 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 PLA2G4FQ68DD2 849 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 CNKSR3Q6P9H4 555 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 FERMT3Q86UX7 667 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 IGSF22Q8N9C0 903 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 CELF4Q9BZC1 486 aaKnown RBP15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 FTOQ9C0B1 505 aaKnown RBP eCLIP15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 ZSWIM4Q9H7M6 989 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 AGO3Q9H9G7 860 aaKnown RBP15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 ARID2Q68CP9 1835 aa15.63■□□□□ 0.09
TSPAN4-220ENST00000532375 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 GPR32O75388 356 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 MAFO75444 373 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 MED24O75448 989 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 PRPHP41219 470 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 CLCN3P51790 818 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 ATP2C1P98194 919 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 PDIA5Q14554 519 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 MTERF2Q49AM1 385 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 EFCAB12Q6NXP0 572 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 BRAPQ7Z569 592 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 RSPH3Q86UC2 560 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 CATSPER3Q86XQ3 398 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 HSCBQ8IWL3 235 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 TPH2Q8IWU9 490 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 LRRC71Q8N4P6 559 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 NEK9Q8TD19 979 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 POLR3CQ9BUI4 534 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 CYP26B1Q9NR63 512 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 SEPT9Q9UHD8 586 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 SQORQ9Y6N5 450 aa15.62■□□□□ 0.09
TSPAN4-220ENST00000532375 A0A087WWV3 80 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 ABHD14A-ACY1A0A1B0GW23 586 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 VPS37CA5D8V6 355 aaPredicted RBP15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 LAD1O00515 517 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 DKC1O60832 514 aaKnown RBP eCLIP15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 BAIAP3O94812 1187 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 GHRP10912 638 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 YWHABP31946 246 aaKnown RBP15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 WDR5P61964 334 aaKnown RBP15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 ECM1Q16610 540 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 IER5Q5VY09 327 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 GPR153Q6NV75 609 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 FAM173BQ6P4H8 233 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 TMEM40Q8WWA1 233 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 ADAMTS10Q9H324 1103 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 DHX33Q9H6R0 707 aaKnown RBP15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 TRPV2Q9Y5S1 764 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 SLC4A7Q9Y6M7 1214 aa15.61■□□□□ 0.09
TSPAN4-220ENST00000532375 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 STX6O43752 255 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 VTNP04004 478 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 ACTN1P12814 892 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 XRCC6P12956 609 aaKnown RBP eCLIP15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 RPA1P27694 616 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 PBX2P40425 430 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 TBC1D8BQ0IIM8 1120 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms