RNA–Protein interactions for RNA: ENST00000532157.5

POLB-217, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-217ENST00000532157 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
POLB-217ENST00000532157 C8orf76Q96K31 380 aa11.84□□□□□ -0.51
POLB-217ENST00000532157 USB1Q9BQ65 265 aaKnown RBP11.84□□□□□ -0.51
POLB-217ENST00000532157 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
POLB-217ENST00000532157 MTG1Q9BT17 334 aaPredicted RBP11.84□□□□□ -0.51
POLB-217ENST00000532157 ALG1Q9BT22 464 aa11.84□□□□□ -0.51
POLB-217ENST00000532157 CD207Q9UJ71 328 aa11.84□□□□□ -0.51
POLB-217ENST00000532157 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
POLB-217ENST00000532157 STK36Q9NRP7 1315 aa11.84□□□□□ -0.51
POLB-217ENST00000532157 F5H6K3 240 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 RBAK-RBAKDNI3L0D1 243 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 NBNO60934 754 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 DTNBO60941 627 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 EFCAB14O75071 495 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 DEXIO95424 95 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 EYA4O95677 639 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 NDUFB10O96000 172 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 BMP3P12645 472 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 IFNAR1P17181 557 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 USP46P62068 366 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 KLRC3Q07444 240 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 COL9A2Q14055 689 aaPredicted RBP11.83□□□□□ -0.52
POLB-217ENST00000532157 PUM1Q14671 1186 aaKnown RBP eCLIP11.83□□□□□ -0.52
POLB-217ENST00000532157 CHST13Q8NET6 341 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 CTAGE1Q96RT6 745 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 RNF26Q9BY78 433 aaPredicted RBP11.83□□□□□ -0.52
POLB-217ENST00000532157 VAT1LQ9HCJ6 419 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
POLB-217ENST00000532157 FBXO40Q9UH90 709 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 FAM208BQ5VWN6 2430 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 SETXQ7Z333 2677 aaKnown RBP11.83□□□□□ -0.52
POLB-217ENST00000532157 RALGAPA2Q2PPJ7 1873 aa11.83□□□□□ -0.52
POLB-217ENST00000532157 ASB14A6NK59 587 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 MYL3P08590 195 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 PDIA4P13667 645 aaKnown RBP11.82□□□□□ -0.52
POLB-217ENST00000532157 SELPP16109 830 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 PTPN11Q06124 597 aaPredicted RBP11.82□□□□□ -0.52
POLB-217ENST00000532157 ZNF543Q08ER8 600 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 IKBKEQ14164 716 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 SAFBQ15424 915 aaKnown RBP eCLIP11.82□□□□□ -0.52
POLB-217ENST00000532157 MCTP1Q6DN14 999 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.82□□□□□ -0.52
POLB-217ENST00000532157 LRRC8DQ7L1W4 858 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 RASGRP2Q7LDG7 609 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 FBXO16Q8IX29 292 aaPredicted RBP11.82□□□□□ -0.52
POLB-217ENST00000532157 TMEM192Q8IY95 271 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 STAG2Q8N3U4 1231 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 PRPF38AQ8NAV1 312 aaKnown RBP11.82□□□□□ -0.52
POLB-217ENST00000532157 CAGE1Q8TC20 777 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 MKL1Q969V6 931 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 COL26A1Q96A83 441 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 MSLNLQ96KJ4 702 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 RIPOR3Q96MK2 946 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 NUP88Q99567 741 aaPredicted RBP11.82□□□□□ -0.52
POLB-217ENST00000532157 RAVER2Q9HCJ3 691 aaKnown RBP11.82□□□□□ -0.52
POLB-217ENST00000532157 BRMS1Q9HCU9 246 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 MAD2L2Q9UI95 211 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 CNTNAP5Q8WYK1 1306 aa11.82□□□□□ -0.52
POLB-217ENST00000532157 TMEM232C9JQI7 657 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 LINC01565O15544 149 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 HOXA2O43364 376 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 STX6O43752 255 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 PARNO95453 639 aaKnown RBP11.81□□□□□ -0.52
POLB-217ENST00000532157 CTDNEP1O95476 244 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 ICAM3P32942 547 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 GTF2F1P35269 517 aaKnown RBP eCLIP11.81□□□□□ -0.52
POLB-217ENST00000532157 NOVP48745 357 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 STAT2P52630 851 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 GUCA2AQ02747 115 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 ADAM15Q13444 863 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 DUSP28Q4G0W2 176 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 EEPD1Q7L9B9 569 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 HEATR3Q7Z4Q2 680 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 FBXO11Q86XK2 927 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 CCDC155Q8N6L0 562 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 TMEM105Q8N8V8 129 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 SMARCC2Q8TAQ2 1214 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 GMCL1Q96IK5 515 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 UBA5Q9GZZ9 404 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 SLC38A10Q9HBR0 1119 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 NOD1Q9Y239 953 aa11.81□□□□□ -0.52
POLB-217ENST00000532157 hCG_1642624A0A1W2PR95 340 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 PALM3A6NDB9 673 aaPredicted RBP11.8□□□□□ -0.52
POLB-217ENST00000532157 PRPF3O43395 683 aaKnown RBP11.8□□□□□ -0.52
POLB-217ENST00000532157 ZBED4O75132 1171 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 SLC16A2P36021 539 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 CPT1AP50416 773 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 MMP16P51512 607 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 GUCY1B3Q02153 619 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 RBL2Q08999 1139 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 PTGISQ16647 500 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 PTPN21Q16825 1174 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 ST3GAL2Q16842 350 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 SYDE2Q5VT97 1194 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 FAM160B2Q86V87 743 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
POLB-217ENST00000532157 SMRP1Q8NCR6 262 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 CCDC148Q8NFR7 591 aa11.8□□□□□ -0.52
POLB-217ENST00000532157 CCDC12Q8WUD4 166 aaPredicted RBP11.8□□□□□ -0.52
POLB-217ENST00000532157 CHURC1Q8WUH1 139 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms