RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ZMYM1Q5SVZ6 1142 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 ALKBH5Q6P6C2 394 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 LBX2Q6XYB7 198 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 KIAA1211Q6ZU35 1233 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 GOT1L1Q8NHS2 421 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 TDRD7Q8NHU6 1098 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 RFFLQ8WZ73 363 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 CPSF2Q9P2I0 782 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 SNX13Q9Y5W8 968 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 DAPK3O43293 454 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 SGPL1O95470 568 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 RPS2P15880 293 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 ATP5F1P24539 256 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 CDK8P49336 464 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 AGFG1P52594 562 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 ZNF543Q08ER8 600 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 POLD3Q15054 466 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 PFKFB4Q16877 469 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 ZACNQ401N2 412 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 ANO6Q4KMQ2 910 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 VWA3BQ502W6 1294 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 CRTC1Q6UUV9 634 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 CPOQ8IVL8 374 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 IGSF22Q8N9C0 903 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 STK35Q8TDR2 534 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 LMBR1Q8WVP7 490 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 ZNF606Q8WXB4 792 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 YME1L1Q96TA2 773 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 BTBD1Q9H0C5 482 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 FANCFQ9NPI8 374 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 EPN1Q9Y6I3 576 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 SYNJ2BP-COX16A0A087WUM0 186 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 A0A096LPE4 126 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 A0A1W2PPZ6 126 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 PI4KAP2A4QPH2 592 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 GOLGA8AA7E2F4 631 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 GOLGA8BA8MQT2 603 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 DDX3XO00571 662 aaKnown RBP eCLIP5.86□□□□□ -1.477e-10■■■□□ 16
ECHDC1-222ENST00000531967 MUSKO15146 869 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 KIF1CO43896 1103 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 FSBPO95073 299 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 ALAS1P13196 640 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 HOXC12P31275 282 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 AKAP17AQ02040 695 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 PDE4BQ07343 736 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 PMS2P11Q13670 270 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 PPA1Q15181 289 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 USP45Q70EL2 814 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 LIX1LQ8IVB5 337 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 BICD2Q8TD16 824 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 ADAMTS15Q8TE58 950 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 HHIPQ96QV1 700 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 CNPPD1Q9BV87 410 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 ADAM19Q9H013 955 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 ACAD9Q9H845 621 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 CABP5Q9NP86 173 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 H2AFY2Q9P0M6 372 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 B4GALT6Q9UBX8 382 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 ASXL2Q76L83 1435 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 H0Y626 953 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 ACKR2O00590 384 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 TRPA1O75762 1119 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 TSHRP16473 764 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 C5AR1P21730 350 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 ATP5DP30049 168 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 HSPA7P48741 367 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 POLD2P49005 469 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 ALDH9A1P49189 494 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 MCM2P49736 904 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 FOXO1Q12778 655 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 SURF1Q15526 300 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 SMAD2Q15796 467 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 BTNL9Q6UXG8 535 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 COL23A1Q86Y22 540 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 TOR1AIP2Q8NFQ8 470 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 RHBDD1Q8TEB9 315 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 UTP15Q8TED0 518 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 BRI3BPQ8WY22 251 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 CBX8Q9HC52 389 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 PREBQ9HCU5 417 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 DCP1AQ9NPI6 582 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 CYP26B1Q9NR63 512 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 KRT84Q9NSB2 600 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 CTNNA3Q9UI47 895 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 SERPINB13Q9UIV8 391 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 COG5Q9UP83 839 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 ATAD2BQ9ULI0 1458 aa5.86□□□□□ -1.47
ECHDC1-222ENST00000531967 POM121BA6NF01 834 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 CCDC69A6NI79 296 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 FSCN2O14926 492 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 USP2O75604 605 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 BBOX1O75936 387 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 RTN3O95197 1032 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 APBB3O95704 486 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 TP53P04637 393 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 GSNP06396 782 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 THP07101 528 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms