RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.77□□□□□ -1.33
CD44-231ENST00000531110 PRAMEF25A6NGN4 478 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 C9orf118A6NHY6 69 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 FOXP2O15409 715 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 GAS7O60861 476 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 MYCLP1P12525 358 aaPredicted RBP6.77□□□□□ -1.33
CD44-231ENST00000531110 PTGS1P23219 599 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 STAT3P40763 770 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 SARSP49591 514 aaKnown RBP6.77□□□□□ -1.33
CD44-231ENST00000531110 OCRLQ01968 901 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 SMAD4Q13485 552 aaKnown RBP6.77□□□□□ -1.33
CD44-231ENST00000531110 DHCR24Q15392 516 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 ZNF174Q15697 407 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 CCDC96Q2M329 555 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 CPZQ66K79 652 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 FSTL4Q6MZW2 842 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 TMC5Q6UXY8 1006 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 RINLQ6ZS11 566 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 CXXC5Q7LFL8 322 aaKnown RBP6.77□□□□□ -1.33
CD44-231ENST00000531110 ANKRD23Q86SG2 305 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 RNF180Q86T96 592 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 NME9Q86XW9 330 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 SDR16C5Q8N3Y7 309 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 EFHBQ8N7U6 833 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 ZNF526Q8TF50 670 aaPredicted RBP6.77□□□□□ -1.33
CD44-231ENST00000531110 E2F7Q96AV8 911 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 KCND1Q9NSA2 647 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 ARHGAP28Q9P2N2 729 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 CEP83Q9Y592 693 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 SPO11Q9Y5K1 396 aa6.77□□□□□ -1.33
CD44-231ENST00000531110 TULP2O00295 520 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 KPNA6O60684 536 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 SOX5P35711 763 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 MASP1P48740 699 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 LMOD3Q0VAK6 560 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 MYBPC2Q14324 1141 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 SMAD2Q15796 467 aaKnown RBP6.76□□□□□ -1.33
CD44-231ENST00000531110 CREB3L3Q68CJ9 461 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 DPP8Q6V1X1 898 aaPredicted RBP6.76□□□□□ -1.33
CD44-231ENST00000531110 LCNL1Q6ZST4 164 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 KRT26Q7Z3Y9 468 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 FAM177A1Q8N128 213 aaPredicted RBP6.76□□□□□ -1.33
CD44-231ENST00000531110 OR2W6PQ8NHA6 318 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 ASB15Q8WXK1 588 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 PCIF1Q9H4Z3 704 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 CAAP1Q9H8G2 361 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 INCENPQ9NQS7 918 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 ARHGAP20Q9P2F6 1191 aa6.76□□□□□ -1.33
CD44-231ENST00000531110 KCNK3O14649 394 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 OFD1O75665 1012 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 COL6A1P12109 1028 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 SCNN1BP51168 640 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 SLURP1P55000 103 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 RTP5Q14D33 572 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 EPHA7Q15375 998 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 STILQ15468 1287 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 CATSPEREQ5SY80 951 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 GPR158Q5T848 1215 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 ZZZ3Q8IYH5 903 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 MSL3Q8N5Y2 521 aaKnown RBP6.75□□□□□ -1.33
CD44-231ENST00000531110 SMC1BQ8NDV3 1235 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 ITFG2Q969R8 447 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 MYCBPQ99417 103 aaPredicted RBP6.75□□□□□ -1.33
CD44-231ENST00000531110 SYT3Q9BQG1 590 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 BTBD2Q9BX70 525 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 IFT57Q9NWB7 429 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 GALNT8Q9NY28 637 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 RAPGEFL1Q9UHV5 662 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 KNSTRNQ9Y448 316 aa6.75□□□□□ -1.33
CD44-231ENST00000531110 RASSF10A6NK89 507 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 GOLGA6L22H0YM25 854 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 DVL2O14641 736 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 FBXO21O94952 628 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 KNG1P01042 644 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 MMEP08473 750 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 ATP2A2P16615 1042 aaKnown RBP6.74□□□□□ -1.33
CD44-231ENST00000531110 KIF11P52732 1056 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 FZD5Q13467 585 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 PCBP1Q15365 356 aaKnown RBP eCLIP6.74□□□□□ -1.33
CD44-231ENST00000531110 SEPT7Q16181 437 aaKnown RBP6.74□□□□□ -1.33
CD44-231ENST00000531110 HS1BP3Q53T59 392 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 KIAA1958Q8N8K9 716 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 MARCH10Q8NA82 808 aaPredicted RBP6.74□□□□□ -1.33
CD44-231ENST00000531110 ADAMTS17Q8TE56 1095 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 CHAC2Q8WUX2 184 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 GBP4Q96PP9 640 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 KCNC2Q96PR1 638 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 FOXB1Q99853 325 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 NCAPGQ9BPX3 1015 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 PAIP2Q9BPZ3 127 aaKnown RBP6.74□□□□□ -1.33
CD44-231ENST00000531110 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.74□□□□□ -1.33
CD44-231ENST00000531110 OXSMQ9NWU1 459 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 RBPJLQ9UBG7 517 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 ZFP69BQ9UJL9 534 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 FBXO10Q9UK96 956 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 KIF3AQ9Y496 699 aa6.74□□□□□ -1.33
CD44-231ENST00000531110 ZEB2O60315 1214 aa6.73□□□□□ -1.33
CD44-231ENST00000531110 TRIM13O60858 407 aa6.73□□□□□ -1.33
CD44-231ENST00000531110 MPIG6BO95866 241 aa6.73□□□□□ -1.33
CD44-231ENST00000531110 CCDC172P0C7W6 258 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms