RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 LRRC71Q8N4P6 559 aa21.05■□□□□ 0.96
GMDS-208ENST00000530927 RDM1Q8NG50 284 aa21.05■□□□□ 0.96
GMDS-208ENST00000530927 NKX2-4Q9H2Z4 354 aa21.05■□□□□ 0.96
GMDS-208ENST00000530927 FOXD4L1Q9NU39 408 aa21.05■□□□□ 0.96
GMDS-208ENST00000530927 SMC3Q9UQE7 1217 aa21.05■□□□□ 0.96
GMDS-208ENST00000530927 LOXHD1Q8IVV2 1947 aa21.05■□□□□ 0.96
GMDS-208ENST00000530927 SMIM35A0A1B0GVV1 85 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 BAG4O95429 457 aaKnown RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 VTNP04004 478 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 U2AF2P26368 475 aaKnown RBP eCLIP21.04■□□□□ 0.963e-7■■□□□ 13.3
GMDS-208ENST00000530927 TOB1P50616 345 aaPredicted RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 CYP4A11Q02928 519 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 MKRN4PQ13434 485 aaPredicted RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 CUL4AQ13619 759 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 MTERF2Q49AM1 385 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 ZNF697Q5TEC3 545 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 MCTP1Q6DN14 999 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 GPR153Q6NV75 609 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 RSPH3Q86UC2 560 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 METTL13Q8N6R0 699 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 ZNF579Q8NAF0 562 aaKnown RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 TNPO1Q92973 898 aaKnown RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 TIFAQ96CG3 184 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 DYDC2Q96IM9 177 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 ZNF668Q96K58 619 aaPredicted RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 FAM167AQ96KS9 214 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 TTC12Q9H892 705 aaPredicted RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 AGO3Q9H9G7 860 aaKnown RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 MTMR10Q9NXD2 777 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 GINS2Q9Y248 185 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 MICAL3Q7RTP6 2002 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 ZBTB39O15060 712 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 BAIAP3O94812 1187 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 ARHGEF15O94989 841 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 DRP2Q13474 957 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 CTTNQ14247 550 aaKnown RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 FBXO47Q5MNV8 452 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 TTC38Q5R3I4 469 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 FAM117BQ6P1L5 589 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 ANO5Q75V66 913 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 SLFN12Q8IYM2 578 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 IL27Q8NEV9 243 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 GUCD1Q96NT3 240 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 CEP89Q96ST8 783 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 IFIH1Q9BYX4 1025 aaKnown RBP21.04■□□□□ 0.96
GMDS-208ENST00000530927 SEMA6BQ9H3T3 888 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 TRPV2Q9Y5S1 764 aa21.04■□□□□ 0.96
GMDS-208ENST00000530927 A0A087WWV3 80 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 POTEMA6NI47 508 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 DDX11L8A8MPP1 907 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 PSMC5P62195 406 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 IKBKEQ14164 716 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 TARBP2Q15633 366 aaKnown RBP21.03■□□□□ 0.96
GMDS-208ENST00000530927 TMEM40Q8WWA1 233 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 LXNQ9BS40 222 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 NRBP2Q9NSY0 501 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 PCDHA12Q9UN75 941 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 PCDHB6Q9Y5E3 794 aa21.03■□□□□ 0.96
GMDS-208ENST00000530927 CD52P31358 61 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 QARSP47897 775 aaKnown RBP21.02■□□□□ 0.96
GMDS-208ENST00000530927 KCNJ6P48051 423 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 NPEPPSP55786 919 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 EPHA7Q15375 998 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 KIZQ2M2Z5 673 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 TMEM266Q2M3C6 531 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 XKR3Q5GH77 459 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 IER5Q5VY09 327 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 EFCAB12Q6NXP0 572 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 SPRED2Q7Z698 418 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 HERC6Q8IVU3 1022 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 LINC01465Q8N7H1 131 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 SEPT8Q92599 483 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 CELF4Q9BZC1 486 aaKnown RBP21.02■□□□□ 0.96
GMDS-208ENST00000530927 SUGCTQ9HAC7 445 aa21.02■□□□□ 0.96
GMDS-208ENST00000530927 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.02■□□□□ 0.96
GMDS-208ENST00000530927 ABHD14A-ACY1A0A1B0GW23 586 aa21.01■□□□□ 0.95
GMDS-208ENST00000530927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.01■□□□□ 0.95
GMDS-208ENST00000530927 H3BQV1 296 aa21.01■□□□□ 0.95
GMDS-208ENST00000530927 P4HBP07237 508 aaKnown RBP21.01■□□□□ 0.95
GMDS-208ENST00000530927 C4orf32Q8N8J7 132 aa21.01■□□□□ 0.95
GMDS-208ENST00000530927 SLC9A7Q96T83 725 aa21.01■□□□□ 0.95
GMDS-208ENST00000530927 EIF2AK1Q9BQI3 630 aaKnown RBP21.01■□□□□ 0.95
GMDS-208ENST00000530927 NIFKQ9BYG3 293 aaKnown RBP21.01■□□□□ 0.95
GMDS-208ENST00000530927 BMP2KQ9NSY1 1161 aaPredicted RBP21.01■□□□□ 0.95
GMDS-208ENST00000530927 CEP131Q9UPN4 1083 aa21.01■□□□□ 0.95
GMDS-208ENST00000530927 KIF3AQ9Y496 699 aa21.01■□□□□ 0.95
GMDS-208ENST00000530927 LCHNA4D1U4 455 aa21■□□□□ 0.95
GMDS-208ENST00000530927 TECP42680 631 aa21■□□□□ 0.95
GMDS-208ENST00000530927 GRIN2CQ14957 1233 aa21■□□□□ 0.95
GMDS-208ENST00000530927 LARP1BQ659C4 914 aaKnown RBP21■□□□□ 0.95
GMDS-208ENST00000530927 TPH2Q8IWU9 490 aa21■□□□□ 0.95
GMDS-208ENST00000530927 OSMRQ99650 979 aa21■□□□□ 0.95
GMDS-208ENST00000530927 ZNF576Q9H609 170 aa21■□□□□ 0.95
GMDS-208ENST00000530927 MSRAQ9UJ68 235 aa21■□□□□ 0.95
GMDS-208ENST00000530927 AKT3Q9Y243 479 aa21■□□□□ 0.95
GMDS-208ENST00000530927 GPR32O75388 356 aa20.99■□□□□ 0.95
GMDS-208ENST00000530927 SLITRK3O94933 977 aa20.99■□□□□ 0.95
GMDS-208ENST00000530927 CA3P07451 260 aa20.99■□□□□ 0.95
GMDS-208ENST00000530927 OR52Z1P0C646 297 aa20.99■□□□□ 0.95
GMDS-208ENST00000530927 TBC1D8BQ0IIM8 1120 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms