RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 SPATA32Q96LK8 384 aa17.94■□□□□ 0.46
BRK1-201ENST00000530758 NT5C3AQ9H0P0 336 aa17.94■□□□□ 0.46
BRK1-201ENST00000530758 TRMT13Q9NUP7 481 aaKnown RBP17.94■□□□□ 0.46
BRK1-201ENST00000530758 DBR1Q9UK59 544 aaKnown RBP17.94■□□□□ 0.46
BRK1-201ENST00000530758 NR2E3Q9Y5X4 410 aa17.94■□□□□ 0.46
BRK1-201ENST00000530758 KDM3AQ9Y4C1 1321 aa17.94■□□□□ 0.46
BRK1-201ENST00000530758 IGKV6-21A0A0C4DH24 114 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 DDX11L8A8MPP1 907 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 ZBTB39O15060 712 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 MAGEB2O15479 319 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 RBL2Q08999 1139 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 PTK7Q13308 1070 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 GRB10Q13322 594 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 ADALQ6DHV7 355 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 USP49Q70CQ1 688 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 CABP7Q86V35 215 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 SERINC5Q86VE9 423 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 C7orf61Q8IZ16 206 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 PPP1R13LQ8WUF5 828 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 EPSTI1Q96J88 318 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 PNMA5Q96PV4 448 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 TRPV6Q9H1D0 765 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 CYP26B1Q9NR63 512 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 ATP11BQ9Y2G3 1177 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 PCDHA2Q9Y5H9 948 aa17.93■□□□□ 0.46
BRK1-201ENST00000530758 TREHO43280 583 aa17.92■□□□□ 0.46
BRK1-201ENST00000530758 PQBP1O60828 265 aaKnown RBP17.92■□□□□ 0.46
BRK1-201ENST00000530758 CHMP4BP1P59074 171 aa17.92■□□□□ 0.46
BRK1-201ENST00000530758 ZNF200P98182 395 aaPredicted RBP17.92■□□□□ 0.46
BRK1-201ENST00000530758 TMEM119Q4V9L6 283 aa17.92■□□□□ 0.46
BRK1-201ENST00000530758 MTHFD1LQ6UB35 978 aa17.92■□□□□ 0.46
BRK1-201ENST00000530758 EXOC8Q8IYI6 725 aa17.92■□□□□ 0.46
BRK1-201ENST00000530758 LINC01465Q8N7H1 131 aa17.92■□□□□ 0.46
BRK1-201ENST00000530758 SYMPKQ92797 1274 aaKnown RBP17.92■□□□□ 0.46
BRK1-201ENST00000530758 PDLIM7Q9NR12 457 aa17.92■□□□□ 0.46
BRK1-201ENST00000530758 SEPT9Q9UHD8 586 aaPredicted RBP17.92■□□□□ 0.46
BRK1-201ENST00000530758 TBX21Q9UL17 535 aa17.92■□□□□ 0.46
BRK1-201ENST00000530758 KIAA1024Q9UPX6 916 aa17.92■□□□□ 0.46
BRK1-201ENST00000530758 SMIM35A0A1B0GVV1 85 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 KIAA0355O15063 1070 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 MAFO75444 373 aaPredicted RBP17.91■□□□□ 0.46
BRK1-201ENST00000530758 C22orf31O95567 290 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 RPLP2P05387 115 aaKnown RBP17.91■□□□□ 0.46
BRK1-201ENST00000530758 CLTBP09497 229 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 NCLP19338 710 aaKnown RBP17.91■□□□□ 0.46
BRK1-201ENST00000530758 KLRC1P26715 233 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 ME1P48163 572 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 RARRES1P49788 294 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 TRIM71Q2Q1W2 868 aaKnown RBP17.91■□□□□ 0.46
BRK1-201ENST00000530758 TAF2Q6P1X5 1199 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 POTEGQ6S5H5 508 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 SHC4Q6S5L8 630 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 CALML4Q96GE6 196 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 DHX33Q9H6R0 707 aaKnown RBP17.91■□□□□ 0.46
BRK1-201ENST00000530758 DDX19AQ9NUU7 478 aaKnown RBP17.91■□□□□ 0.46
BRK1-201ENST00000530758 TUBE1Q9UJT0 475 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 ZMYND8Q9ULU4 1186 aaPredicted RBP17.91■□□□□ 0.46
BRK1-201ENST00000530758 DNM3Q9UQ16 869 aa17.91■□□□□ 0.46
BRK1-201ENST00000530758 FAM237AA0A1B0GTK4 181 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 TMEM150BA6NC51 233 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 CAND2O75155 1236 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 EYA4O95677 639 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 CMA1P23946 247 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 FXR1P51114 621 aaKnown RBP eCLIP17.9■□□□□ 0.46
BRK1-201ENST00000530758 NPEPPSP55786 919 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 SPECC1Q5M775 1068 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 RESP18Q5W5W9 173 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 NME8Q8N427 588 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 PIGOQ8TEQ8 1089 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 TRAPPC12Q8WVT3 735 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 DHX38Q92620 1227 aaKnown RBP17.9■□□□□ 0.46
BRK1-201ENST00000530758 CEP170P1Q96L14 293 aa17.9■□□□□ 0.46
BRK1-201ENST00000530758 JPH2Q9BR39 696 aaPredicted RBP17.9■□□□□ 0.46
BRK1-201ENST00000530758 A0A1W2PQ27 194 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 A0A1W2PQ64 194 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 A0A1W2PQD8 194 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 PITPNM1O00562 1244 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 SYN1P17600 705 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 RFC5P40937 340 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 IGBP1P78318 339 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 MTERF2Q49AM1 385 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 XKR9Q5GH70 373 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 PLA2G4FQ68DD2 849 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 TRMT1LQ7Z2T5 733 aaKnown RBP17.89■□□□□ 0.45
BRK1-201ENST00000530758 KCNK18Q7Z418 384 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 CAGE1Q8TC20 777 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 GDF15Q99988 308 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 TMEM39AQ9NV64 488 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 CCDC39Q9UFE4 941 aa17.89■□□□□ 0.45
BRK1-201ENST00000530758 A0A087WWV3 80 aa17.88■□□□□ 0.45
BRK1-201ENST00000530758 TRIM43BA6NCK2 446 aa17.88■□□□□ 0.45
BRK1-201ENST00000530758 E9PMD0 336 aa17.88■□□□□ 0.45
BRK1-201ENST00000530758 GAS2O43903 313 aaKnown RBP17.88■□□□□ 0.45
BRK1-201ENST00000530758 DGAT1O75907 488 aa17.88■□□□□ 0.45
BRK1-201ENST00000530758 CYP2C9P11712 490 aa17.88■□□□□ 0.45
BRK1-201ENST00000530758 TXLNAP40222 546 aa17.88■□□□□ 0.45
BRK1-201ENST00000530758 TBC1D8BQ0IIM8 1120 aa17.88■□□□□ 0.45
BRK1-201ENST00000530758 KARSQ15046 597 aaKnown RBP17.88■□□□□ 0.45
BRK1-201ENST00000530758 FAM26DQ5JW98 314 aa17.88■□□□□ 0.45
BRK1-201ENST00000530758 SH3RF1Q7Z6J0 888 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms